Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 AC209154.1-201ENST00000582156 337 ntBASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 MIR3609-201ENST00000582661 80 ntBASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 IPO5P1-202ENST00000600039 287 ntBASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 AC211433.2-201ENST00000608433 387 ntBASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
PCDHGA11Q9Y5H2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 MIR448-201ENST00000362131 111 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU6-799P-201ENST00000363567 107 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU6-727P-201ENST00000363592 107 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU6-270P-201ENST00000364131 105 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU1-64P-201ENST00000365443 163 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU4-17P-201ENST00000365598 141 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU5E-9P-201ENST00000411164 104 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AL441985.1-201ENST00000457727 251 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AC093270.2-201ENST00000486157 792 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AC006445.2-201ENST00000510061 472 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AL110118.1-201ENST00000553543 400 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AL008718.3-201ENST00000610217 321 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 AL034408.1-202ENST00000636088 415 ntBASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA11Q9Y5H2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RNA5SP191-201ENST00000362585 102 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU6-1130P-201ENST00000365434 107 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU6-1027P-201ENST00000383998 107 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 AC245028.1-201ENST00000423259 256 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 Z74021.1-201ENST00000423610 407 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RPS20P10-201ENST00000451209 253 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RNA5SP310-201ENST00000459084 116 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RPS27AP9-201ENST00000477681 438 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU1-61P-201ENST00000516107 151 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU2-58P-201ENST00000516403 183 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 AC027176.1-201ENST00000560204 514 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 MIR3934-201ENST00000579806 107 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 MIR4737-201ENST00000583979 81 ntBASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA11Q9Y5H2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHGA11Q9Y5H2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
PCDHGA11Q9Y5H2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
PCDHGA11Q9Y5H2 Y_RNA.75-201ENST00000362927 97 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-324P-201ENST00000363957 106 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU2-2P-201ENST00000410396 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 AC096649.2-201ENST00000416186 393 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 RN7SL41P-201ENST00000476144 297 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 AC006517.1-201ENST00000480485 328 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 AC108022.1-201ENST00000493466 478 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-107P-201ENST00000516643 102 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 SUMO2P18-201ENST00000518873 252 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU2-4P-201ENST00000606190 192 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.15-201ENST00000611544 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 AC023043.4-201ENST00000612081 449 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.16-201ENST00000613119 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.12-201ENST00000613778 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.9-201ENST00000615427 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.11-201ENST00000616345 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.2-201ENST00000616535 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.3-201ENST00000617785 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.19-201ENST00000618602 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU2-1-201ENST00000618664 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.6-201ENST00000619225 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.5-201ENST00000619465 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 MIR6853-201ENST00000619642 74 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 U2.10-201ENST00000620268 191 ntBASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms