Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MIR411-201ENST00000362239 96 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 RNU1-33P-201ENST00000364249 162 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 RNU6-290P-201ENST00000365212 101 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 RNU6-741P-201ENST00000383889 107 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AL033519.2-201ENST00000403958 392 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 RNA5SP120-201ENST00000410900 112 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 MTATP6P29-201ENST00000415057 132 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 RPL27AP8-201ENST00000424277 446 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AC124916.1-201ENST00000444020 547 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 snoU109.2-201ENST00000459316 135 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 RN7SL807P-201ENST00000470923 297 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 Y_RNA.703-201ENST00000516846 111 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AP006245.1-201ENST00000522549 120 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AP002392.1-201ENST00000537692 208 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AC090132.2-201ENST00000615881 347 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AC027309.3-201ENST00000623419 351 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 AC233981.2-201ENST00000611524 1614 ntBASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RTCBQ9Y3I0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RNU6-1301P-201ENST00000362724 104 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RNU4-90P-201ENST00000362773 141 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RNU6-78P-201ENST00000362897 107 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RNU6-335P-201ENST00000364563 113 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 SNORD63-201ENST00000384262 68 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RNU6-102P-201ENST00000384485 104 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 MIR708-201ENST00000390708 88 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 AL358453.1-201ENST00000422522 250 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 Z82188.1-201ENST00000436709 154 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 SNORA71B-202ENST00000439232 272 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RPL21P10-201ENST00000463521 490 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RPS26P21-201ENST00000475397 348 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 KC877373.1-201ENST00000479066 408 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 RAC1P2-201ENST00000511164 579 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 AC011476.5-201ENST00000615594 130 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 SCARNA4-202ENST00000625402 129 ntBASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RTCBQ9Y3I0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 RNU2-68P-201ENST00000410878 191 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AC017079.2-201ENST00000416102 485 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AC098614.2-201ENST00000426040 255 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AL590383.1-201ENST00000428602 75 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AC107393.1-201ENST00000512403 346 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 RN7SKP272-201ENST00000516988 232 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 AC010620.2-201ENST00000600135 313 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 MIR7154-201ENST00000620673 73 ntBASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RTCBQ9Y3I0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTCBQ9Y3I0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTCBQ9Y3I0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.71□□□□□ -1.65
RTCBQ9Y3I0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 RNU6-72P-201ENST00000384285 79 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 MIR128-1-201ENST00000384921 82 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 RBMY2UP-201ENST00000453474 324 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 HMGB1P22-201ENST00000505315 124 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 SEPT14P8-201ENST00000508026 178 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 AC024405.2-202ENST00000532731 184 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 SCARNA4-201ENST00000629045 128 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTCBQ9Y3I0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms