Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-715P-201ENST00000365204 103 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 MIR29B2-201ENST00000385055 81 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 SUMO2P12-201ENST00000405924 140 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 RNU2-32P-201ENST00000411193 191 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 RPL31P63-201ENST00000422565 375 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 MTND2P4-201ENST00000445034 1004 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC079448.1-201ENST00000449377 373 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AL353752.1-201ENST00000454946 260 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 RPL30P12-201ENST00000474666 353 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 RPL30P1-201ENST00000488676 339 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC117532.1-201ENST00000514638 323 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC091135.1-201ENST00000585943 307 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AL109918.3-201ENST00000603072 338 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 SEPT7P9-203ENST00000604116 343 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 Z82243.1-201ENST00000609432 473 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC063944.3-201ENST00000609969 533 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AL442067.2-201ENST00000614033 363 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AL132822.1-201ENST00000617063 513 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 uc_338.11-201ENST00000619132 160 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 U4.7-201ENST00000638126 106 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 AC008555.8-201ENST00000623602 2168 ntBASIC1.73□□□□□ -2.13
KCNIP3Q9Y2W7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-944P-201ENST00000364023 107 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-546P-201ENST00000383991 107 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-1029P-201ENST00000384109 107 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 RNU6-611P-201ENST00000384276 104 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 RNU4-46P-201ENST00000410818 138 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 AC133104.1-201ENST00000429100 218 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 MRPS17P9-201ENST00000511924 393 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 RNA5SP503-201ENST00000517047 117 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 AC022616.8-201ENST00000533569 253 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 AC008945.2-201ENST00000606056 604 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 AC009487.4-201ENST00000624969 3585 ntBASIC1.72□□□□□ -2.13
KCNIP3Q9Y2W7 ZNF702P-202ENST00000434269 1966 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC062016.1-201ENST00000355719 319 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 U3.4-201ENST00000363352 213 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 Y_RNA.324-201ENST00000365165 102 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-282P-201ENST00000365357 103 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 RNU4-48P-201ENST00000365559 182 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 PIGFP2-201ENST00000421400 651 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC022364.2-201ENST00000457963 554 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 RPS29P15-201ENST00000458329 171 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC097462.2-201ENST00000504623 481 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 SLC25A15P5-201ENST00000508033 253 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 RNA5SP281-201ENST00000516504 135 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 RNU6-1178P-201ENST00000516674 107 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 MIR4319-201ENST00000577285 85 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 MIR4287-201ENST00000579398 78 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC078795.2-201ENST00000602835 1252 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AL392048.1-201ENST00000613946 534 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AC091834.1-201ENST00000614543 472 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 AL359314.1-201ENST00000616913 261 ntBASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
KCNIP3Q9Y2W7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms