Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AL583843.1-201ENST00000456070 346 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 KPNA2P1-201ENST00000458289 1591 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.631-201ENST00000459607 101 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 RN7SL283P-201ENST00000489055 303 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC139453.3-201ENST00000493276 369 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 RPL23AP94-201ENST00000512518 302 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC093303.1-201ENST00000514549 295 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 SNORD59.2-201ENST00000516873 68 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 SNORA31.19-201ENST00000517079 126 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC010653.1-201ENST00000571108 881 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 MIR2682-201ENST00000580305 110 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AP000787.2-201ENST00000604432 568 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC007938.3-201ENST00000604965 623 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC006386.2-201ENST00000624491 75 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC012005.1-201ENST00000624575 75 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 AC008264.2-201ENST00000610193 3731 ntBASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SSX2IPQ9Y2D8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 FAM35BP-202ENST00000497389 3337 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AC000403.1-201ENST00000613696 3585 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 MIR369-201ENST00000362155 70 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.162-201ENST00000363683 102 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.197-201ENST00000364004 102 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 SNORD14B-201ENST00000364533 90 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 SNORD15B-201ENST00000384714 146 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-1106P-201ENST00000390845 107 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 SNORA75.4-201ENST00000391278 119 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AL445529.1-201ENST00000398713 389 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-1050P-201ENST00000410388 107 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 TMEM167AP1-201ENST00000423409 219 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AC092573.2-201ENST00000434546 243 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 CST9LP2-201ENST00000437612 320 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 MIR3124-201ENST00000582636 67 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AC018462.2-201ENST00000605375 395 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AL161423.1-201ENST00000613700 262 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 AL669831.3-213ENST00000636676 183 ntBASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSX2IPQ9Y2D8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 SNORA80A-201ENST00000363922 136 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 SNORA71.1-201ENST00000364523 117 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.395-201ENST00000383945 109 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-217P-201ENST00000384164 104 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-692P-201ENST00000384496 107 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 SNORA44-201ENST00000384584 132 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-310P-201ENST00000384655 107 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 MIR34A-201ENST00000385130 110 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC098614.2-201ENST00000426040 255 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC007560.1-201ENST00000426912 237 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AL078601.1-201ENST00000444542 271 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC096576.1-201ENST00000489014 359 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC097473.1-201ENST00000508142 408 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC026782.1-201ENST00000512952 449 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-572P-201ENST00000516724 80 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 CASP1P1-201ENST00000526345 212 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC007536.1-201ENST00000533382 349 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 MIR3171-201ENST00000584270 74 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC078899.3-201ENST00000599065 212 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AL355598.1-201ENST00000604169 202 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AP000654.2-201ENST00000605633 586 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC019193.3-201ENST00000609144 554 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 FTX_3.1-201ENST00000610451 147 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 MIR7106-201ENST00000612419 65 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 MIR6852-201ENST00000621699 66 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 AC244517.12-201ENST00000623581 663 ntBASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.38□□□□□ -1.87
SSX2IPQ9Y2D8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 Y_RNA.445-201ENST00000384168 102 ntBASIC3.37□□□□□ -1.87
SSX2IPQ9Y2D8 RNU6-474P-201ENST00000384243 107 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms