Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NOD1Q9Y239 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NOD1Q9Y239 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NOD1Q9Y239 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NOD1Q9Y239 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.71□□□□□ -1.66
NOD1Q9Y239 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.71□□□□□ -1.66
NOD1Q9Y239 AC092268.1-201ENST00000342691 405 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 RNU6-873P-201ENST00000363833 107 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 Y_RNA.233-201ENST00000364407 101 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 RNU6-923P-201ENST00000364753 107 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 RNA5SP240-201ENST00000365355 128 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 RNA5SP171-201ENST00000391071 115 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 PTMAP2-201ENST00000397627 327 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 Y_RNA.595-201ENST00000410403 105 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 CTSL3P-202ENST00000412179 788 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 AC138623.1-201ENST00000418060 216 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.71□□□□□ -1.66
NOD1Q9Y239 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.71□□□□□ -1.66
NOD1Q9Y239 AC244670.1-201ENST00000436879 112 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 AC007395.1-201ENST00000451333 677 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 RNA5SP73-201ENST00000516744 108 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.71□□□□□ -1.66
NOD1Q9Y239 NACAP3-201ENST00000552100 481 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 MIR4472-2-201ENST00000582069 67 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 AL357075.2-201ENST00000614906 189 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NOD1Q9Y239 MAPK10-349ENST00000641767 3661 ntBASIC4.71□□□□□ -1.66
NOD1Q9Y239 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NOD1Q9Y239 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NOD1Q9Y239 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
NOD1Q9Y239 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NOD1Q9Y239 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 RNU6-918P-201ENST00000391219 106 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 RNU6ATAC-201ENST00000408749 126 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NOD1Q9Y239 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NOD1Q9Y239 RPL21P104-201ENST00000464143 478 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 RPS29P26-201ENST00000477483 171 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 RNA5SP54-201ENST00000516951 92 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 CKS1BP7-201ENST00000522230 235 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 AL606490.9-201ENST00000603331 271 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 AL078605.1-201ENST00000603529 500 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 AC010999.1-201ENST00000611856 324 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 AC073349.3-201ENST00000617616 186 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.7□□□□□ -1.66
NOD1Q9Y239 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NOD1Q9Y239 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NOD1Q9Y239 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.7□□□□□ -1.66
NOD1Q9Y239 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NOD1Q9Y239 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NOD1Q9Y239 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 AC008725.1-201ENST00000605123 2263 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 RNA5SP307-201ENST00000362863 116 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 RNU6-1035P-201ENST00000384477 107 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 MTATP6P29-201ENST00000415057 132 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 AP000705.1-201ENST00000454567 350 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 RPL26P9-201ENST00000457466 433 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 AP001324.2-201ENST00000461163 319 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 AC091021.1-201ENST00000468051 388 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 RPS29P19-201ENST00000479709 171 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 RNU6-928P-201ENST00000516876 104 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 RN7SKP289-201ENST00000517244 295 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 MIR3529-201ENST00000637713 78 ntBASIC4.69□□□□□ -1.66
NOD1Q9Y239 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NOD1Q9Y239 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NOD1Q9Y239 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NOD1Q9Y239 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NOD1Q9Y239 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
NOD1Q9Y239 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 Z82217.1-201ENST00000625157 8149 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 RNU1-20P-201ENST00000363314 162 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 RNA5SP197-201ENST00000363357 119 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 Y_RNA.240-201ENST00000364469 95 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 RNA5SP151-201ENST00000365632 117 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 RNU6-213P-201ENST00000384051 104 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 MIR921-201ENST00000401133 56 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 FTH1P6-201ENST00000430768 320 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.68□□□□□ -1.66
NOD1Q9Y239 RPS26P2-201ENST00000440331 348 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 RPL39P29-201ENST00000447779 157 ntBASIC4.68□□□□□ -1.66
NOD1Q9Y239 HMGN2P10-201ENST00000448085 265 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms