Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU1-32P-201ENST00000363937 159 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 MIR518D-201ENST00000385014 87 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 RNU6-279P-201ENST00000391297 101 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 RPL23AP93-201ENST00000440847 484 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 RNU7-115P-201ENST00000516433 55 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 MIR4715-201ENST00000584117 79 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 RN7SL435P-201ENST00000584418 282 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 AC020895.1-201ENST00000595362 272 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 AP000550.3-201ENST00000637734 379 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 OR9K1P-202ENST00000641111 3217 ntBASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
TRIM35Q9UPQ4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 MAPK10-263ENST00000641052 4307 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 CPHL1P-201ENST00000461341 3407 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 Y_RNA.342-201ENST00000365352 113 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 Z98749.2-208ENST00000381646 500 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AC008134.1-201ENST00000420943 193 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 MTATP6P21-201ENST00000440681 189 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 RPL26P9-201ENST00000457466 433 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AC022137.1-201ENST00000483735 151 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 SNORD84-203ENST00000584275 78 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AC011471.1-201ENST00000585766 187 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AC099778.2-201ENST00000610904 211 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 MIR6891-201ENST00000618788 93 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AL513302.2-201ENST00000562313 1842 ntBASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM35Q9UPQ4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM35Q9UPQ4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM35Q9UPQ4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.96□□□□□ -1.45
TRIM35Q9UPQ4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM35Q9UPQ4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 OR56B2P-202ENST00000641377 2453 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 Y_RNA.52-201ENST00000362760 96 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 RNA5SP496-201ENST00000391240 109 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 RN7SKP101-201ENST00000411376 320 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 AL732292.1-201ENST00000426692 226 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 RPL39P39-201ENST00000455840 151 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 AC108751.2-201ENST00000469993 231 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 RN7SKP21-201ENST00000516503 220 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 AL121603.1-201ENST00000553815 142 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 AL136164.3-201ENST00000624429 3978 ntBASIC5.96□□□□□ -1.46
TRIM35Q9UPQ4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 Y_RNA.17-201ENST00000362433 111 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 Y_RNA.625-201ENST00000411256 107 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 COX6CP6-201ENST00000490840 228 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 SNORA70.12-201ENST00000516084 153 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 RNU6-1299P-201ENST00000516316 100 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 RNU6-1183P-201ENST00000517054 60 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 RNA5SP291-201ENST00000517222 105 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 MIR5096-201ENST00000583713 70 ntBASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM35Q9UPQ4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 Y_RNA.78-201ENST00000362970 110 ntBASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 RNU6-173P-201ENST00000364215 104 ntBASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 Z98745.1-201ENST00000402553 494 ntBASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 AC010618.1-201ENST00000469924 477 ntBASIC5.94□□□□□ -1.46
TRIM35Q9UPQ4 KC877373.1-201ENST00000479066 408 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms