Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.638-201ENST00000459374 113 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 UBE2CP3-201ENST00000502715 450 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 AC025445.1-201ENST00000502728 300 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 AC025884.1-201ENST00000556034 378 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 MIR3144-201ENST00000579460 79 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 SNORA43.4-201ENST00000629559 138 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 AL353743.1-202ENST00000431724 1695 ntBASIC4.19□□□□□ -1.74
AP4E1Q9UPM8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 MAPK10-253ENST00000641010 4072 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RNU6-942P-201ENST00000363002 107 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RNU6-527P-201ENST00000363425 104 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RNA5SP130-201ENST00000364431 114 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 SNORD32A-201ENST00000364805 84 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 SNORA29-201ENST00000384183 140 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RNA5SP44-201ENST00000410446 133 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RNA5SP306-201ENST00000411087 107 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RNU6-1001P-201ENST00000411265 100 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RPL23AP95-201ENST00000426806 265 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 MTCO1P5-201ENST00000433573 344 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 NUTF2P7-201ENST00000453086 375 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 AP001324.2-201ENST00000461163 319 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RPL31P13-201ENST00000484151 370 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RN7SL271P-201ENST00000487601 295 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RPL31P61-201ENST00000496160 376 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.679-201ENST00000516416 91 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 RNU6-1183P-201ENST00000517054 60 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 MRPS18CP4-201ENST00000535821 231 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 AL078605.1-201ENST00000603529 500 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 MIR6868-201ENST00000611215 58 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 AL079305.1-201ENST00000623159 3008 ntBASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
AP4E1Q9UPM8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 MIR410-201ENST00000362222 80 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 RNU5B-2P-201ENST00000363036 113 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.136-201ENST00000363444 102 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 SNORA62-201ENST00000365493 153 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 RNU6-81P-201ENST00000365608 104 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.435-201ENST00000384095 112 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 RNU6-514P-201ENST00000384208 107 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 RPS26P8-201ENST00000393490 348 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 MIR1251-201ENST00000408552 70 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AC009237.8-201ENST00000445492 379 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 snoU13.4-201ENST00000458916 104 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AC117440.1-201ENST00000474107 571 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AP001025.1-201ENST00000486139 332 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AL132838.2-201ENST00000492041 314 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AC083809.1-201ENST00000615051 472 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 AL365265.1-201ENST00000621045 234 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 IGHVIII-44-202ENST00000636235 289 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 MIR492-201ENST00000638676 116 ntBASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
AP4E1Q9UPM8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AC118273.1-201ENST00000525324 3006 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 RNA5SP197-201ENST00000363357 119 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 RNU6-961P-201ENST00000363893 105 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 Y_RNA.319-201ENST00000365138 92 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 AC068538.1-201ENST00000376856 336 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 RNU6-1289P-201ENST00000384431 106 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 SNORA70C-201ENST00000384538 135 ntBASIC4.16□□□□□ -1.74
AP4E1Q9UPM8 RN7SL860P-201ENST00000473738 223 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms