Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MTND3P7-201ENST00000474435 343 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 RPL38P4-201ENST00000502376 214 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 SNORA43.2-201ENST00000516652 128 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 SNORA31.23-201ENST00000517219 133 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AP002453.2-201ENST00000533503 320 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC012414.6-201ENST00000568241 401 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC025165.5-201ENST00000602802 578 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AC241585.2-209ENST00000638217 143 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 AP006437.1-201ENST00000641440 3685 ntBASIC1.95□□□□□ -2.1
NPIPA1Q9UND3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 U3.4-201ENST00000363352 213 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 SNORA25B-201ENST00000365507 128 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 MIR1-2-201ENST00000384961 85 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 MIR95-201ENST00000385072 81 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC074117.2-201ENST00000417130 397 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 GPM6BP3-201ENST00000442797 145 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 MTND2P4-201ENST00000445034 1004 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC079781.2-201ENST00000446424 169 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC006026.2-201ENST00000457376 180 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC104435.1-201ENST00000483483 166 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AP001025.1-201ENST00000486139 332 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC116337.1-201ENST00000509680 687 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 SNORA31.25-201ENST00000517242 134 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 RNU6-586P-201ENST00000517265 104 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC073539.2-201ENST00000597113 165 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 NIFKP6-201ENST00000598115 845 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AP001486.3-201ENST00000615334 372 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 AC120349.3-201ENST00000624377 529 ntBASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA1Q9UND3 MTND5P17-201ENST00000418405 1603 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 FGF7P2-201ENST00000332473 296 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 RNU6-212P-201ENST00000362642 104 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 Y_RNA.201-201ENST00000364052 96 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 RNU6-622P-201ENST00000384272 103 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 USP9YP8-201ENST00000441913 500 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AL031659.1-201ENST00000447075 539 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 PSPHP1-201ENST00000450062 261 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AL162395.1-201ENST00000457882 422 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 SNORD42A-201ENST00000459584 64 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 RPL30P12-201ENST00000474666 353 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 SNORA48.11-201ENST00000517015 89 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC107953.1-201ENST00000522216 297 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC064872.1-201ENST00000604823 1072 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC098657.3-201ENST00000620434 263 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC011155.2-201ENST00000623202 216 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 AC131280.1-202ENST00000624067 4211 ntBASIC1.93□□□□□ -2.1
NPIPA1Q9UND3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AL356292.1-201ENST00000283110 373 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 RNU6-487P-201ENST00000365430 104 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 RAP1BP3-201ENST00000407180 549 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 MTND1P23-201ENST00000416931 372 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 MTND3P17-201ENST00000416968 344 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 RPS6P15-201ENST00000431996 751 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 RNA5SP269-201ENST00000459032 137 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC107032.1-201ENST00000485945 480 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC109329.1-201ENST00000518744 317 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC090897.2-201ENST00000581715 130 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AL031274.2-201ENST00000599419 203 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AL670379.2-201ENST00000604983 252 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC098614.4-201ENST00000607601 462 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 AC002543.1-201ENST00000299783 1954 ntBASIC1.92□□□□□ -2.1
NPIPA1Q9UND3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms