Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MIR3199-1-201ENST00000582434 88 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 MIR548AC-201ENST00000585049 88 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 CLIC4P2-201ENST00000601934 717 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 SEPT7P9-203ENST00000604116 343 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL670379.10-201ENST00000604330 253 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL670379.2-201ENST00000604983 252 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL670379.4-201ENST00000605279 254 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL670379.9-201ENST00000605428 253 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC138393.1-203ENST00000327086 343 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 RNU6-169P-201ENST00000365336 107 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 Z98749.2-208ENST00000381646 500 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 RNU6-220P-201ENST00000390919 107 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 RNU2-40P-201ENST00000410833 196 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL030996.1-201ENST00000411430 235 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 BTF3P4-201ENST00000418852 495 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 HMGN2P19-201ENST00000425149 265 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 MTATP6P17-201ENST00000431030 672 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL627311.1-201ENST00000431514 115 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 NDUFB1P2-201ENST00000449477 176 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC080013.2-201ENST00000460866 323 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 SNORA31.6-201ENST00000516241 130 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 SNORA18.6-201ENST00000516792 115 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 ACA59.2-201ENST00000517061 156 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC060788.1-201ENST00000521318 469 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC098848.2-201ENST00000588023 330 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 RNU6-91P-201ENST00000607774 107 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 AC109347.2-201ENST00000610220 349 ntBASIC2.36□□□□□ -2.03
NPC1L1Q9UHC9 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 RNU6-661P-201ENST00000362409 107 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 Y_RNA.22-201ENST00000362492 102 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 RNU6-61P-201ENST00000365528 109 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 RNU6-898P-201ENST00000365627 104 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 CISD1P1-201ENST00000393907 327 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 Y_RNA.623-201ENST00000411128 95 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 RNA5SP111-201ENST00000411386 101 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 RPS15AP9-201ENST00000439856 381 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC022364.2-201ENST00000457963 554 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 SCARNA24.1-201ENST00000516465 137 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC010186.2-204ENST00000537668 439 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC104581.2-201ENST00000572227 430 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 MIR5692A1-201ENST00000580523 69 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC008121.1-201ENST00000603244 268 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AL021997.1-201ENST00000605757 193 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 MIR98-201ENST00000606724 119 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC126118.1-201ENST00000607744 628 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC069294.1-201ENST00000608397 350 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC073114.1-201ENST00000612027 490 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC072046.2-201ENST00000618366 268 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AC097520.1-201ENST00000624435 385 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 AL157786.1-207ENST00000627771 695 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 U6.114-201ENST00000636407 96 ntBASIC2.35□□□□□ -2.03
NPC1L1Q9UHC9 Y_RNA.201-201ENST00000364052 96 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 RNU6-108P-201ENST00000365558 107 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 U8.10-201ENST00000384260 133 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AL627390.1-201ENST00000396055 340 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 U6atac.2-201ENST00000408644 118 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 MTND3P17-201ENST00000416968 344 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AL353706.1-201ENST00000436728 494 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AC012308.1-201ENST00000451232 178 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AC006026.2-201ENST00000457376 180 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AC090572.1-201ENST00000519251 160 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 AL138889.2-201ENST00000603883 242 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 MIR3974-201ENST00000637126 96 ntBASIC2.34□□□□□ -2.04
NPC1L1Q9UHC9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 MIR518D-201ENST00000385014 87 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 U3.40-201ENST00000408706 208 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 C1DP2-201ENST00000418167 426 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 AC090960.1-201ENST00000421072 306 ntBASIC2.33□□□□□ -2.04
NPC1L1Q9UHC9 PIGFP2-201ENST00000421400 651 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms