Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MTND1P3-201ENST00000484956 952 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 RNU6-1028P-201ENST00000517164 93 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AL356057.1-201ENST00000533798 831 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AC090115.3-201ENST00000553218 849 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AC092325.1-201ENST00000566449 554 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AC005786.1-201ENST00000588553 154 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AC078795.2-201ENST00000602835 1252 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AL078604.3-201ENST00000615580 211 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 AC018926.1-201ENST00000616335 435 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 MTND5P42-201ENST00000637720 498 ntBASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VPS29Q9UBQ0 snoU2_19.1-201ENST00000362361 80 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 Y_RNA.33-201ENST00000362591 102 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 RNU6-112P-201ENST00000363599 104 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 RNU5A-8P-201ENST00000364102 114 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 SNORA40.2-201ENST00000390847 128 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 MIR320C1-201ENST00000408566 88 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AL591212.2-201ENST00000433923 257 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AC027119.1-201ENST00000440877 241 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 JTBP1-201ENST00000441314 247 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 MTCO1P27-201ENST00000448269 226 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 SNRPFP4-201ENST00000456366 242 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AC130509.1-201ENST00000464158 433 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 MTND1P16-201ENST00000465177 898 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AP001025.1-201ENST00000486139 332 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AL354696.1-201ENST00000614652 497 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 AC068880.4-201ENST00000623082 495 ntBASIC0.97□□□□□ -2.25
VPS29Q9UBQ0 RNU6-942P-201ENST00000363002 107 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 SNORA62.1-201ENST00000364287 154 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 SNORA4.3-201ENST00000365564 137 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 MTND4P3-201ENST00000417829 541 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 USP9YP21-201ENST00000420603 432 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AL583843.1-201ENST00000456070 346 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC108059.3-201ENST00000456388 214 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 RPL26P26-201ENST00000480251 434 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AL133373.1-201ENST00000497098 94 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC079140.2-201ENST00000506193 142 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 RNU7-40P-201ENST00000516397 64 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 RNU6-914P-201ENST00000516749 109 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC019176.1-201ENST00000518519 225 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AP003355.1-201ENST00000518956 587 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC137800.2-201ENST00000574375 120 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC112220.2-201ENST00000605513 533 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 AC092574.1-201ENST00000609771 420 ntBASIC0.96□□□□□ -2.26
VPS29Q9UBQ0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 Y_RNA.327-201ENST00000365201 102 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 RNU6-224P-201ENST00000384055 107 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 Y_RNA.597-201ENST00000410463 100 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 RPL21P90-201ENST00000415692 466 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AL589872.1-201ENST00000426602 288 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AL669831.1-202ENST00000428504 417 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 CBX3P6-201ENST00000430257 527 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 UBE2V1P8-201ENST00000437166 265 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AL163540.1-201ENST00000485382 386 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 RAB11AP2-201ENST00000545905 639 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 CR383656.8-201ENST00000549046 145 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 MIR1273C-201ENST00000578669 77 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 MIR3937-201ENST00000580135 106 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AC123767.1-202ENST00000620407 817 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AC022513.1-201ENST00000624512 117 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 AC068205.3-201ENST00000636385 468 ntBASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS29Q9UBQ0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 SNORD33-201ENST00000362761 85 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 SNORD114-6-201ENST00000364393 72 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 RNU6-395P-201ENST00000365662 106 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 FGF7P8-201ENST00000402994 292 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 AL365338.1-201ENST00000422282 858 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 RPS15AP10-201ENST00000432472 382 ntBASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS29Q9UBQ0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms