| HCN3 | Q9P1Z3 | uc_338.14-201 | ENST00000613162 | 166 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AL136221.1-201 | ENST00000621449 | 509 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | VSTM2A-OT1-201 | ENST00000456049 | 3031 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | FAM35CP-201 | ENST00000554755 | 2470 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | CACNB4-238 | ENST00000636901 | 7706 nt | TSL 5 BASIC | 2.85 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | NEBL-202 | ENST00000377122 | 9216 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | EFCAB3-202 | ENST00000450662 | 1694 nt | TSL 5 BASIC | 2.85 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AC000403.1-201 | ENST00000613696 | 3585 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | GMFB-208 | ENST00000554908 | 6721 nt | TSL 1 (best) BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | Y_RNA.160-201 | ENST00000363677 | 92 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | Y_RNA.414-201 | ENST00000384011 | 101 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | RNU6-214P-201 | ENST00000384130 | 107 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | SNORA46-201 | ENST00000384762 | 135 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AL445529.1-201 | ENST00000398713 | 389 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AL513008.1-201 | ENST00000412701 | 161 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AC245054.2-201 | ENST00000415639 | 319 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AC026355.1-201 | ENST00000423466 | 587 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AL359672.1-201 | ENST00000442302 | 409 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | UQCRHP3-201 | ENST00000451503 | 251 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AC112771.1-201 | ENST00000463581 | 102 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | RN7SKP282-201 | ENST00000516824 | 299 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AP005597.4-201 | ENST00000526762 | 229 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AC007536.1-201 | ENST00000533382 | 349 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AP001094.1-201 | ENST00000579805 | 193 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AC103810.1-201 | ENST00000579873 | 453 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AL121917.1-203 | ENST00000605534 | 577 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | HTN1-205 | ENST00000610341 | 536 nt | APPRIS P1 TSL 1 (best) BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AC007318.2-201 | ENST00000620999 | 243 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | MIR6852-201 | ENST00000621699 | 66 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | AL161782.1-201 | ENST00000622930 | 586 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| HCN3 | Q9P1Z3 | DCLRE1A-202 | ENST00000369305 | 4241 nt | APPRIS P1 TSL 5 BASIC | 2.84 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | ATP8A2P2-201 | ENST00000437678 | 1568 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL359854.1-201 | ENST00000614203 | 1594 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | MUM1L1-203 | ENST00000372552 | 3957 nt | APPRIS P1 TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL109809.4-201 | ENST00000603520 | 2185 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | MTND5P30-201 | ENST00000452896 | 1731 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | IL23R-205 | ENST00000637002 | 2208 nt | TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | SNORA68.1-201 | ENST00000364537 | 132 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL354864.1-201 | ENST00000373226 | 539 nt | TSL 2 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNU6-1140P-201 | ENST00000410517 | 106 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | VN1R36P-201 | ENST00000414936 | 291 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL109947.1-201 | ENST00000423747 | 382 nt | TSL 2 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL136369.1-201 | ENST00000437825 | 244 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL138900.1-201 | ENST00000449345 | 399 nt | TSL 3 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RPL23AP70-201 | ENST00000483361 | 460 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | SNORA31.23-201 | ENST00000517219 | 133 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC105999.1-201 | ENST00000518722 | 473 nt | TSL 3 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC022784.2-201 | ENST00000521298 | 328 nt | TSL 2 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC107953.1-201 | ENST00000522216 | 297 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC008083.3-201 | ENST00000547777 | 329 nt | TSL 3 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC107016.2-201 | ENST00000547968 | 190 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL133279.1-202 | ENST00000556789 | 456 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC087749.2-201 | ENST00000583910 | 352 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC011712.1-201 | ENST00000588959 | 234 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC019159.1-201 | ENST00000605094 | 187 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC022017.1-201 | ENST00000608793 | 559 nt | TSL 4 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | FAM157A-202 | ENST00000615155 | 405 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC010722.1-201 | ENST00000622595 | 582 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC138627.2-201 | ENST00000624202 | 601 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL365361.1-201 | ENST00000566942 | 3481 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | ZBTB26-202 | ENST00000373656 | 4443 nt | APPRIS P1 TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | MBNL3-205 | ENST00000370857 | 8760 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | TCF12-203 | ENST00000343827 | 3956 nt | TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | COPS2-203 | ENST00000542928 | 1580 nt | TSL 2 BASIC | 2.83 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RGPD3-202 | ENST00000409886 | 5594 nt | APPRIS P2 TSL 1 (best) BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL445259.1-201 | ENST00000587106 | 2984 nt | TSL 5 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | CCDC66-201 | ENST00000326595 | 3027 nt | APPRIS P3 TSL 1 (best) BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNU6-105P-201 | ENST00000363909 | 104 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNU6-1283P-201 | ENST00000365314 | 105 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | MIR218-1-201 | ENST00000384999 | 110 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | MT-TL1-201 | ENST00000386347 | 75 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNA5SP274-201 | ENST00000410484 | 108 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNU6-1148P-201 | ENST00000410992 | 104 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNU6-1245P-201 | ENST00000411130 | 106 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNU6-293P-201 | ENST00000411259 | 106 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL731684.2-201 | ENST00000426839 | 333 nt | TSL 5 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC124916.1-201 | ENST00000444020 | 547 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | Z96811.1-201 | ENST00000445880 | 108 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RPL7P12-201 | ENST00000446719 | 750 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC019155.3-201 | ENST00000454957 | 600 nt | TSL 2 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RNU7-66P-201 | ENST00000459469 | 62 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC133134.1-201 | ENST00000466800 | 359 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | S100A11P2-201 | ENST00000467589 | 312 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RPL22P13-201 | ENST00000493291 | 347 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | TRBVA-201 | ENST00000498804 | 316 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC010486.1-201 | ENST00000511793 | 424 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC108067.1-201 | ENST00000514304 | 215 nt | TSL 5 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RN7SKP256-201 | ENST00000517201 | 314 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC090568.2-205 | ENST00000518631 | 576 nt | TSL 4 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC022039.1-201 | ENST00000527110 | 488 nt | TSL 2 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC008115.2-201 | ENST00000539988 | 241 nt | TSL 3 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC026371.1-201 | ENST00000551867 | 419 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AL136038.2-201 | ENST00000553983 | 283 nt | TSL 3 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC074052.2-201 | ENST00000562516 | 214 nt | TSL 3 BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | RPS15AP11-201 | ENST00000594193 | 385 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | ELOCP5-201 | ENST00000604924 | 333 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC096772.1-201 | ENST00000609146 | 564 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| HCN3 | Q9P1Z3 | AC064836.2-201 | ENST00000609491 | 462 nt | BASIC | 2.82 | □□□□□ -1.96 | | |