Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 MYL8P-204ENST00000431574 518 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AL714022.1-201ENST00000439897 151 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC104472.2-201ENST00000469035 601 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC008526.1-201ENST00000509149 338 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-327P-201ENST00000516270 127 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RN7SKP272-201ENST00000516988 232 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC009902.1-201ENST00000519351 183 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC093249.1-201ENST00000567049 203 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR4790-201ENST00000577799 79 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR4782-201ENST00000577987 79 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AP000942.4-201ENST00000604811 241 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 MTND4LP32-201ENST00000636111 270 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AC010680.1-201ENST00000590024 3590 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.259-201ENST00000364619 101 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-1297P-201ENST00000384415 104 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORA44-201ENST00000384584 132 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 RPL5P18-201ENST00000406671 891 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 MTND2P23-201ENST00000422990 651 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AL590632.1-201ENST00000424289 371 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC098614.2-201ENST00000426040 255 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.635-201ENST00000459041 101 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU1-86P-201ENST00000516108 154 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-559P-201ENST00000516151 98 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU1-107P-201ENST00000516617 154 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORA31.19-201ENST00000517079 126 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 NACAP3-201ENST00000552100 481 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC020661.2-201ENST00000560114 134 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC138761.3-201ENST00000579993 334 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 NUTF2P8-201ENST00000604593 363 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AL360085.1-201ENST00000604713 532 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 U2.21-201ENST00000637295 81 ntBASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NCKIPSDQ9NZQ3 AC138393.1-203ENST00000327086 343 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORA80A-201ENST00000363922 136 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORD42.2-201ENST00000365570 69 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR548P-201ENST00000408336 84 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 RN7SKP220-201ENST00000410611 288 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 BMS1P22-201ENST00000414726 313 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 RPL7P10-201ENST00000417407 739 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AL139281.1-201ENST00000422120 335 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 RPL21P40-201ENST00000428586 483 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 HMGB1P9-201ENST00000429856 646 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 BRK1P2-201ENST00000442875 223 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AL078601.1-201ENST00000444542 271 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 MTATP6P7-201ENST00000453315 681 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC130509.1-201ENST00000464158 433 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 RPS27AP10-201ENST00000496103 208 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC008885.1-201ENST00000514930 301 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-1332P-201ENST00000516666 104 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 APOOP3-201ENST00000536787 586 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AL365361.1-201ENST00000566942 3481 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 MIR3941-201ENST00000582572 103 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC006504.6-201ENST00000590142 199 ntBASIC3.06□□□□□ -1.92
NCKIPSDQ9NZQ3 AC007938.3-201ENST00000604965 623 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms