Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 snoU13.14-201ENST00000459372 104 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 AC103851.1-201ENST00000506833 274 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 SNORA25.11-201ENST00000515935 105 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 AC009812.2-201ENST00000517657 457 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 HPRT1P3-201ENST00000539521 576 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 MIR4790-201ENST00000577799 79 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 uc_338.1-201ENST00000612113 180 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 AL355365.1-201ENST00000616480 294 ntBASIC3.47□□□□□ -1.85
DDX56Q9NY93 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.47□□□□□ -1.85
DDX56Q9NY93 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
DDX56Q9NY93 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX56Q9NY93 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.46□□□□□ -1.86
DDX56Q9NY93 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
DDX56Q9NY93 RNU6-655P-201ENST00000362858 107 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 RNU6-1317P-201ENST00000364582 104 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 RNU6-805P-201ENST00000365643 106 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
DDX56Q9NY93 RNA5SP44-201ENST00000410446 133 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 RNU6-1140P-201ENST00000410517 106 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 RNU2-25P-201ENST00000411041 191 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
DDX56Q9NY93 EIF4EP4-201ENST00000424916 578 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 AL445687.1-201ENST00000439946 251 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 MRPL50P4-201ENST00000446432 475 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 Y_RNA.682-201ENST00000516457 100 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 RNU1-54P-201ENST00000517181 120 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 LARP7P1-201ENST00000605576 316 ntBASIC3.46□□□□□ -1.86
DDX56Q9NY93 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
DDX56Q9NY93 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
DDX56Q9NY93 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
DDX56Q9NY93 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
DDX56Q9NY93 SNORD62.1-201ENST00000362541 86 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 RNU6-1210P-201ENST00000363775 107 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 Y_RNA.184-201ENST00000363884 108 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 SNORA73.2-201ENST00000364946 201 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 MIR554-201ENST00000384874 96 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
DDX56Q9NY93 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX56Q9NY93 DAP3P1-201ENST00000441522 278 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 AC093019.1-201ENST00000443135 252 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 MTND1P17-201ENST00000448961 204 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 EEF1B2P7-201ENST00000451177 676 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 AC107399.1-201ENST00000451226 265 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX56Q9NY93 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX56Q9NY93 RNU2-53P-201ENST00000516257 147 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 AC026403.1-201ENST00000518938 295 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX56Q9NY93 AP005902.1-201ENST00000521358 186 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 AC019193.3-201ENST00000609144 554 ntBASIC3.45□□□□□ -1.86
DDX56Q9NY93 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX56Q9NY93 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX56Q9NY93 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DDX56Q9NY93 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
DDX56Q9NY93 AP000560.1-201ENST00000624150 1937 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
DDX56Q9NY93 RNU6-43P-201ENST00000384302 107 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC074085.1-201ENST00000413598 418 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC078809.1-201ENST00000427601 140 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX56Q9NY93 HMGB1P18-201ENST00000438801 619 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX56Q9NY93 snoU13.22-201ENST00000459428 104 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC146507.2-201ENST00000460608 476 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 SNRPGP7-201ENST00000469016 106 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC016632.1-201ENST00000503994 196 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 RNU1-45P-201ENST00000517191 141 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 RN7SKP40-201ENST00000517211 242 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AP005639.2-201ENST00000527592 928 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX56Q9NY93 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
DDX56Q9NY93 CPDP1-201ENST00000579660 283 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC243960.4-201ENST00000600532 288 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AL670379.2-201ENST00000604983 252 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC124303.1-201ENST00000605703 360 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AL133215.3-201ENST00000609801 448 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 MIR8076-201ENST00000611401 83 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 AC025253.1-201ENST00000613623 543 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 TPTEP1-208ENST00000636884 213 ntBASIC3.44□□□□□ -1.86
DDX56Q9NY93 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX56Q9NY93 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX56Q9NY93 RNU1-70P-201ENST00000362618 164 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 SNORD56.3-201ENST00000363507 71 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 RNU6-142P-201ENST00000384019 107 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 RN7SKP61-201ENST00000410642 295 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 RPS29P4-201ENST00000414733 161 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.43□□□□□ -1.86
DDX56Q9NY93 EIF1AXP1-201ENST00000419267 435 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX56Q9NY93 AL590632.1-201ENST00000424289 371 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 RPL23AP22-201ENST00000437556 453 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX56Q9NY93 AC115115.1-201ENST00000449927 248 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 MTND1P11-201ENST00000456661 876 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 RNU7-187P-201ENST00000458985 68 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 AC073901.1-201ENST00000462471 408 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 CKS1BP2-201ENST00000497342 240 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 RPS27P27-201ENST00000498779 255 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 AC022447.4-201ENST00000504053 364 ntBASIC3.43□□□□□ -1.86
DDX56Q9NY93 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms