Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 LRRC37A5P-203ENST00000580181 585 ntBASIC2□□□□□ -2.09
HPF1Q9NWY4 AL136363.2-201ENST00000604173 851 ntBASIC2□□□□□ -2.09
HPF1Q9NWY4 AL136370.1-201ENST00000608166 691 ntBASIC2□□□□□ -2.09
HPF1Q9NWY4 AC099842.1-201ENST00000619919 596 ntBASIC2□□□□□ -2.09
HPF1Q9NWY4 AC138649.3-201ENST00000622154 254 ntBASIC2□□□□□ -2.09
HPF1Q9NWY4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HPF1Q9NWY4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HPF1Q9NWY4 RNU6-371P-201ENST00000364283 108 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HPF1Q9NWY4 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AL033519.2-201ENST00000403958 392 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 RN7SKP32-201ENST00000410167 303 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 Y_RNA.598-201ENST00000410480 95 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 EIF4EP2-201ENST00000422816 654 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 RPS15AP10-201ENST00000432472 382 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.99□□□□□ -2.09
HPF1Q9NWY4 RPL30P1-201ENST00000488676 339 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AC092436.1-201ENST00000506450 503 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 RNU2-44P-201ENST00000516795 194 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 IGKV3-31-201ENST00000523109 329 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AC005771.1-201ENST00000585581 349 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AC234772.3-201ENST00000602277 528 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AL022345.1-201ENST00000607292 135 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AL159153.1-201ENST00000619688 317 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 RMST_7.1-201ENST00000621935 268 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AL160394.1-201ENST00000624765 724 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 AC110994.2-201ENST00000635481 492 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
HPF1Q9NWY4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 MIR597-201ENST00000384968 97 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AL591043.1-201ENST00000432461 424 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 RPL39P29-201ENST00000447779 157 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 YWHAEP4-201ENST00000505390 198 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AP002453.2-201ENST00000533503 320 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AL121992.2-201ENST00000606262 256 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 AL133173.2-201ENST00000614270 90 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
HPF1Q9NWY4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
HPF1Q9NWY4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.97□□□□□ -2.09
HPF1Q9NWY4 RNU6-527P-201ENST00000363425 104 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 HIGD1AP15-201ENST00000416198 280 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 AC011233.1-201ENST00000422812 283 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 CBX3P6-201ENST00000430257 527 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 AL121890.1-201ENST00000435457 205 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 TAF9P1-201ENST00000445421 515 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 TAF9P2-201ENST00000454958 515 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 SNRPFP4-201ENST00000456366 242 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 AC104435.1-201ENST00000483483 166 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HPF1Q9NWY4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.97□□□□□ -2.09
HPF1Q9NWY4 SCARNA24.1-201ENST00000516465 137 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 AC009977.1-201ENST00000586015 570 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 SEPT7P9-203ENST00000604116 343 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 AL022161.1-201ENST00000604390 213 ntBASIC1.97□□□□□ -2.09
HPF1Q9NWY4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
HPF1Q9NWY4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HPF1Q9NWY4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AC005005.2-201ENST00000420779 380 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 MTND4P20-201ENST00000424125 869 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AC000111.3-201ENST00000433478 193 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 MTATP6P16-201ENST00000434543 526 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 IFNA20P-201ENST00000436840 528 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.96□□□□□ -2.1
HPF1Q9NWY4 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 RPL30P6-201ENST00000475925 342 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 MTND3P25-201ENST00000509243 135 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 MTCYBP40-201ENST00000509390 1135 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 FABP5P5-201ENST00000515537 406 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 Vault.3-201ENST00000516676 95 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 RNU6-1220P-201ENST00000517126 108 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 HSPE1P18-201ENST00000517602 280 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 GNAI2P1-201ENST00000541815 315 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AC063943.3-201ENST00000615562 356 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AC009159.2-201ENST00000617603 606 ntBASIC1.96□□□□□ -2.1
HPF1Q9NWY4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.96□□□□□ -2.1
HPF1Q9NWY4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
HPF1Q9NWY4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HPF1Q9NWY4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HPF1Q9NWY4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HPF1Q9NWY4 Y_RNA.576-201ENST00000384781 102 ntBASIC1.95□□□□□ -2.1
HPF1Q9NWY4 RNU4-26P-201ENST00000410270 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms