Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC107401.1-201ENST00000503426 685 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 SNORA48.11-201ENST00000517015 89 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 MIR5194-201ENST00000582634 120 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AL670379.2-201ENST00000604983 252 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AL359198.2-201ENST00000611836 194 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 uc_338.34-201ENST00000617467 174 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AC139792.3-201ENST00000623525 224 ntBASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.75□□□□□ -1.97
BLOC1S4Q9NUP1 AL365361.1-201ENST00000566942 3481 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 RNU1-72P-201ENST00000362976 153 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-525P-201ENST00000363685 104 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 Y_RNA.559-201ENST00000384686 107 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-1158P-201ENST00000391167 107 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 AL606923.1-201ENST00000406616 190 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 MTCYBP8-201ENST00000422855 651 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 SNORA40.12-201ENST00000516329 111 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 MIR3162-201ENST00000581818 82 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 AL136363.2-201ENST00000604173 851 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 AC080013.6-201ENST00000606185 215 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 U4.3-201ENST00000621047 82 ntBASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BLOC1S4Q9NUP1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-37P-201ENST00000362692 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 Y_RNA.194-201ENST00000363985 102 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-11P-201ENST00000364234 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 SNORA67.1-201ENST00000364749 141 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-25P-201ENST00000383873 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-1-201ENST00000383898 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-48P-201ENST00000384161 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-36P-201ENST00000384172 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-4P-201ENST00000384205 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-5P-201ENST00000384238 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-3P-201ENST00000384314 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-16P-201ENST00000384385 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-15P-201ENST00000384534 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-2-201ENST00000384627 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-29P-201ENST00000384637 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-9-201ENST00000384776 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-33P-201ENST00000384793 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AL359511.1-201ENST00000402970 211 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AP000705.1-201ENST00000454567 350 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU7-180P-201ENST00000459240 63 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AC090515.1-201ENST00000465295 476 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RPL23AP45-201ENST00000476406 468 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 MIR4446-201ENST00000578505 67 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AL356575.1-201ENST00000603008 283 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AL713866.2-201ENST00000603579 219 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-6P-201ENST00000606623 107 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AL158209.2-201ENST00000619266 216 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 OR5AK4P-201ENST00000635912 903 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
BLOC1S4Q9NUP1 AC016717.2-201ENST00000609089 5141 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-212P-201ENST00000362642 104 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 RNA5SP393-201ENST00000363423 117 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-266P-201ENST00000364225 107 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 RNU4-24P-201ENST00000364565 139 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 OR5H15-201ENST00000383696 930 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC068050.1-201ENST00000394891 380 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AL353193.1-201ENST00000421444 268 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC008267.5-201ENST00000424928 265 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AL606489.2-201ENST00000433886 234 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC009238.1-201ENST00000442165 424 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC009237.6-201ENST00000446969 424 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 SRRM1P2-201ENST00000464531 1192 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC083798.1-201ENST00000472671 131 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 SNORA25.17-201ENST00000517184 124 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 COPS8P3-201ENST00000526024 482 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms