Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 MIR7975-201ENST00000619350 68 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 MIR7641-1-201ENST00000627518 61 ntBASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
CDC42SE1Q9NRR8 AC010615.1-201ENST00000594254 1764 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA4.1-201ENST00000364263 144 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 MIR200C-201ENST00000384980 68 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RPS20P2-201ENST00000402520 389 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RAP1BP3-201ENST00000407180 549 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RN7SKP32-201ENST00000410167 303 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 NFU1P1-201ENST00000413128 774 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RPS15AP12-201ENST00000419498 388 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AL353777.1-201ENST00000425552 326 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RSL24D1P3-201ENST00000449255 495 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 PPIAP20-201ENST00000449839 135 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC006026.2-201ENST00000457376 180 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RNA5SP269-201ENST00000459032 137 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RPL36AP21-201ENST00000490372 323 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RNU2-10P-201ENST00000516375 211 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-1003P-201ENST00000517099 105 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-201P-201ENST00000517100 61 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA31.24-201ENST00000517232 57 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 MIR4307-201ENST00000582802 84 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 BNIP3P31-201ENST00000604515 566 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC090578.1-201ENST00000604955 591 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC135507.2-201ENST00000612443 309 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AL359547.2-201ENST00000615810 418 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 U6.105-201ENST00000637379 88 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 MTND5P6-201ENST00000422338 1798 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AL445523.1-201ENST00000451184 1362 ntBASIC0.57□□□□□ -2.32
CDC42SE1Q9NRR8 AC233981.2-201ENST00000611524 1614 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 ZNF72P-201ENST00000425869 1908 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RNY4P24-201ENST00000362735 96 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA51.1-201ENST00000363243 140 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-371P-201ENST00000364283 108 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RNY4P16-201ENST00000364768 94 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-968P-201ENST00000384076 107 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA29-201ENST00000384183 140 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-1179P-201ENST00000384667 107 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 MIR146A-201ENST00000385201 99 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RNU6-1176P-201ENST00000390955 107 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RNU2-72P-201ENST00000411175 163 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RN7SKP263-201ENST00000411194 309 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 EEF1A1P40-201ENST00000412883 573 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 OR6C66P-201ENST00000414917 930 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC019070.1-201ENST00000415008 1024 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC003989.2-201ENST00000440224 169 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 SNRPEP8-201ENST00000442866 260 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RPL31P3-201ENST00000458430 332 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 snoU13.30-201ENST00000458951 104 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RN7SL610P-201ENST00000463845 291 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 FTH1P2-201ENST00000466086 412 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC145146.1-201ENST00000496370 254 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC005741.1-201ENST00000511094 432 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 MTND2P31-201ENST00000512602 616 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 RN7SKP157-201ENST00000516174 282 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 SUMO2P18-201ENST00000518873 252 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 MTND2P7-201ENST00000521337 640 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 HMGB1P33-201ENST00000563485 527 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC069114.2-201ENST00000604699 304 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AL592221.1-201ENST00000605266 382 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AP002360.4-201ENST00000606980 481 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AL365434.2-201ENST00000607979 234 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 U6.42-201ENST00000618440 107 ntBASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
CDC42SE1Q9NRR8 AC099786.3-201ENST00000565735 1410 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 SNORA44-201ENST00000384584 132 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 MIR183-201ENST00000384958 110 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL023284.1-201ENST00000403956 276 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL117342.1-201ENST00000404861 406 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 RNU2-2P-201ENST00000410396 191 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 MTATP6P20-201ENST00000414147 562 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AC013410.2-201ENST00000422627 201 ntBASIC0.55□□□□□ -2.32
CDC42SE1Q9NRR8 AL590556.1-201ENST00000423231 483 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms