Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RNA5SP219-201ENST00000390940 113 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 RNU6-700P-201ENST00000391043 107 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 RNU2-15P-201ENST00000410692 191 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 AL596276.1-201ENST00000434465 418 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 UBE2V1P5-201ENST00000440070 405 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 AC130509.1-201ENST00000464158 433 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 MIR3678-201ENST00000578455 94 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 AL353778.1-201ENST00000603149 408 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 AC005858.4-201ENST00000623191 700 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 MIR4315-1-201ENST00000636800 73 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 MIR4315-2-201ENST00000640925 73 ntBASIC-0.37□□□□□ -2.47
SMCO4Q9NRQ5 SNORD114-9-201ENST00000364370 72 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 BX664727.1-201ENST00000416024 466 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 RPP40P1-201ENST00000426762 456 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 FABP5P4-201ENST00000437203 171 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 HMGN1P12-201ENST00000499125 195 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 AC025459.1-201ENST00000504072 156 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 HMGB1P29-201ENST00000505659 499 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 BNIP3P8-201ENST00000597863 560 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 AC138627.2-201ENST00000624202 601 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 AC022513.1-201ENST00000624512 117 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 ZNF849P-201ENST00000594711 1566 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 MTND5P16-201ENST00000460269 1703 ntBASIC-0.38□□□□□ -2.47
SMCO4Q9NRQ5 RNA5SP62-201ENST00000363457 110 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AF228730.1-201ENST00000397972 663 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 RNA5SP111-201ENST00000411386 101 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 RPS15AP9-201ENST00000439856 381 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC067940.1-201ENST00000458411 300 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC048334.1-201ENST00000477975 159 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC093534.1-201ENST00000504977 132 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 RNA5SP481-201ENST00000516814 122 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC104417.1-201ENST00000523974 751 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC090888.2-201ENST00000559765 1144 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC112191.3-201ENST00000604371 277 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AC004067.1-201ENST00000608733 700 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 AL590240.4-201ENST00000616908 390 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 U6.107-201ENST00000637108 79 ntBASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
SMCO4Q9NRQ5 MIR103A1-201ENST00000362165 78 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 SNORA42.1-201ENST00000363515 137 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 RNU6-152P-201ENST00000384037 107 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 RNA5SP496-201ENST00000391240 109 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 AL121978.1-201ENST00000402778 359 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 RAC1P8-201ENST00000427086 527 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 AL445305.1-201ENST00000432577 575 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 AL008629.1-201ENST00000438615 184 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 MTCYBP43-201ENST00000513621 740 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 RNA5SP437-201ENST00000517249 129 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 SUMO2P16-201ENST00000519475 264 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 BPTFP1-201ENST00000579209 492 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 MIR5190-201ENST00000581537 80 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 MIR4769-201ENST00000584126 77 ntBASIC-0.4□□□□□ -2.47
SMCO4Q9NRQ5 AL079343.1-201ENST00000572358 1771 ntBASIC-0.41□□□□□ -2.47
SMCO4Q9NRQ5 SNRPEP3-201ENST00000338402 276 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 NEFMP1-201ENST00000443423 1006 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AC093259.1-201ENST00000509755 300 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 RNU6-678P-201ENST00000516832 109 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AC022861.1-201ENST00000522981 663 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 MIR4298-201ENST00000584380 73 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AL078603.1-201ENST00000603824 313 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 HMGB1P51-201ENST00000605166 638 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 AL159152.1-201ENST00000635019 2587 ntBASIC-0.41□□□□□ -2.48
SMCO4Q9NRQ5 SNORA36.2-201ENST00000384004 127 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 SNORA80D-201ENST00000384488 135 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 RNU1-139P-201ENST00000391307 165 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 AL392003.1-201ENST00000434394 243 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 HMGN2P34-201ENST00000437647 269 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 ZNF705CP-201ENST00000530515 889 ntBASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.42□□□□□ -2.48
SMCO4Q9NRQ5 AC098614.4-201ENST00000607601 462 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms