Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AL356535.1-201ENST00000440335 398 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 HMGN2P10-201ENST00000448085 265 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 RPS26P45-201ENST00000471748 340 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 RPS27AP10-201ENST00000496103 208 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 ENPP7P9-201ENST00000514456 627 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 RNU7-115P-201ENST00000516433 55 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 AC107918.3-201ENST00000533272 382 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 AC025281.1-201ENST00000567026 265 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 AL034555.1-201ENST00000604816 211 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 OR51H2P-202ENST00000641424 3046 ntBASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRDM9Q9NQV7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PRDM9Q9NQV7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 U3.8-201ENST00000363675 217 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 U1.1-201ENST00000384101 164 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AL603914.1-201ENST00000401964 204 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 MIR1278-201ENST00000408753 81 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AL139281.1-201ENST00000422120 335 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 Z82209.1-201ENST00000422141 2135 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 EIF4HP2-201ENST00000424380 563 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 NDUFB4P6-201ENST00000436819 366 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 RN7SL132P-201ENST00000478131 296 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 RN7SL319P-201ENST00000480656 221 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AC093270.2-201ENST00000486157 792 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AC140172.1-201ENST00000502928 141 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 AC131055.1-201ENST00000584626 316 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 INTS6P1-201ENST00000504674 2530 ntBASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.71□□□□□ -1.66
PRDM9Q9NQV7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 AL513302.2-201ENST00000562313 1842 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 RNA5SP123-201ENST00000363244 119 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 SNORA58B-201ENST00000364259 136 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 SNORA70.10-201ENST00000384515 134 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 U8.12-201ENST00000384701 133 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 SNORA68.2-201ENST00000391263 128 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 SNORA36B-201ENST00000410438 131 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 Y_RNA.622-201ENST00000411091 108 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 RNU2-55P-201ENST00000411146 174 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 AC004866.1-201ENST00000411748 78 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 PSMD10P3-201ENST00000437000 448 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 HSPE1P21-201ENST00000438283 308 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 RPL39P40-201ENST00000445481 146 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 AL691482.1-201ENST00000453255 87 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 Y_RNA.649-201ENST00000459077 103 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 snoU13.20-201ENST00000459180 104 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 RPS29P2-201ENST00000479278 136 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 RPL30P11-203ENST00000598995 310 ntBASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
PRDM9Q9NQV7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 AL592182.3-201ENST00000642132 3304 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 U8.6-201ENST00000364939 135 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 RN7SKP125-201ENST00000410481 302 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 RN7SKP101-201ENST00000411376 320 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 CYCSP49-201ENST00000420810 319 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 RPS27P18-201ENST00000431701 247 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 SNRPGP8-201ENST00000454064 226 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 SRIP1-201ENST00000489235 288 ntBASIC4.69□□□□□ -1.66
PRDM9Q9NQV7 RNU5F-2P-201ENST00000516066 82 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms