Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 MIR5583-1-201ENST00000580941 59 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 MIR4424-201ENST00000585257 86 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC004223.2-201ENST00000590309 544 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AL590808.1-201ENST00000618696 141 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AL359880.1-201ENST00000621879 266 ntBASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
SNX25Q9H3E2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 Y_RNA.255-201ENST00000364581 97 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 SNORA80E-201ENST00000384744 137 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 RPS15AP28-201ENST00000435088 386 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 FABP5P14-201ENST00000437273 393 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 MTND1P1-201ENST00000445453 368 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC011753.1-201ENST00000451001 220 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 SNRPFP3-201ENST00000457792 225 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC083798.1-201ENST00000472671 131 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AP004607.1-201ENST00000524456 203 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC022880.1-201ENST00000534017 973 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 BNIP3P6-201ENST00000549284 499 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AL356280.1-201ENST00000603614 379 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC092954.2-201ENST00000609103 430 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC015540.1-201ENST00000615828 501 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC073534.2-201ENST00000620377 381 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AC022418.1-201ENST00000624118 445 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNX25Q9H3E2 AL359854.1-201ENST00000614203 1594 ntBASIC2.48□□□□□ -2.01
SNX25Q9H3E2 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 RNA5SP126-201ENST00000365092 109 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 RNU1-51P-201ENST00000365345 176 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 Y_RNA.399-201ENST00000383955 105 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 RNU6-434P-201ENST00000384376 107 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 MIR218-1-201ENST00000384999 110 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 RNU6-220P-201ENST00000390919 107 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 RPL30P4-201ENST00000429309 333 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 RPL7P54-201ENST00000438336 674 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 SRRM1P2-201ENST00000464531 1192 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 MED28P2-201ENST00000475771 317 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AC019235.1-201ENST00000503847 207 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.47□□□□□ -2.01
SNX25Q9H3E2 SNORA25.11-201ENST00000515935 105 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 SNORA43.2-201ENST00000516652 128 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.47□□□□□ -2.01
SNX25Q9H3E2 PRELID2P1-201ENST00000552837 301 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AC245505.1-201ENST00000556398 224 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.47□□□□□ -2.01
SNX25Q9H3E2 MIR3199-1-201ENST00000582434 88 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 MIR4765-201ENST00000585007 77 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AC024581.2-201ENST00000619986 252 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 AP003400.5-201ENST00000624827 617 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 SCARNA4-202ENST00000625402 129 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 MTND4P27-201ENST00000450813 1354 ntBASIC2.47□□□□□ -2.01
SNX25Q9H3E2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNX25Q9H3E2 MTND5P30-201ENST00000452896 1731 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 Y_RNA.324-201ENST00000365165 102 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 RNU6-843P-201ENST00000384454 104 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 RNU6-780P-201ENST00000391030 104 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 PSPHP1-201ENST00000450062 261 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 CCDC34P1-201ENST00000507441 517 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AC009646.1-201ENST00000510455 318 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 RNU6-835P-201ENST00000516974 104 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 SCARNA3-201ENST00000517097 143 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 SNORA25.17-201ENST00000517184 124 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AL121917.1-203ENST00000605534 577 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AL021997.1-201ENST00000605757 193 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 RNU6-91P-201ENST00000607774 107 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AC093788.1-201ENST00000609356 927 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 HULC.1-201ENST00000612720 240 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AC064859.1-201ENST00000624741 174 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 Z69720.2-201ENST00000624755 279 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 AC099654.12-201ENST00000639868 649 ntBASIC2.46□□□□□ -2.02
SNX25Q9H3E2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SNX25Q9H3E2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms