Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AC027309.3-201ENST00000623419 351 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 AL450472.1-202ENST00000637286 180 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 MFSD8-236ENST00000641509 4050 ntBASIC3.93□□□□□ -1.78
RNF38Q9H0F5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
RNF38Q9H0F5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AL353746.1-201ENST00000566293 6881 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 MIR412-201ENST00000362142 91 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 snoU2_19.2-201ENST00000363024 80 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 SNORD14B-201ENST00000364533 90 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.277-201ENST00000364754 102 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.297-201ENST00000364950 91 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.358-201ENST00000365491 99 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.785-201ENST00000384290 109 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AL603910.2-201ENST00000407268 136 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 TOMM20P4-201ENST00000427861 435 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC011742.1-201ENST00000431448 434 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC067942.3-201ENST00000512025 362 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AL590705.4-201ENST00000532209 134 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC090877.1-201ENST00000561418 344 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC008121.1-201ENST00000603244 268 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC008739.3-201ENST00000603262 127 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC012531.5-201ENST00000611375 151 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AL161629.2-201ENST00000615347 275 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 MIR376A1-201ENST00000616574 68 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 AC009093.8-201ENST00000641769 292 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 UBE3AP2-201ENST00000429033 2259 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 MAPK10-372ENST00000641954 3413 ntBASIC3.92□□□□□ -1.78
RNF38Q9H0F5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF38Q9H0F5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.16-201ENST00000362421 102 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.27-201ENST00000362540 103 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.29-201ENST00000362570 113 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 RNU6-428P-201ENST00000362942 107 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.270-201ENST00000364693 104 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 MIR10A-201ENST00000385043 110 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AP000275.1-201ENST00000411943 390 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AL117339.3-201ENST00000418733 162 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AC092047.1-201ENST00000424997 240 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 HIGD1AP2-201ENST00000446367 280 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AL513124.1-201ENST00000450410 614 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 RPL30P10-201ENST00000488148 337 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AC104619.4-201ENST00000510773 249 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 RNU6-612P-201ENST00000516909 102 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AC093023.1-201ENST00000547375 507 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AC136932.1-201ENST00000574771 208 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 MIR3922-201ENST00000585192 84 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AC008962.1-201ENST00000605729 304 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 FTX_2.1-201ENST00000618816 94 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 U6.92-201ENST00000636464 89 ntBASIC3.91□□□□□ -1.78
RNF38Q9H0F5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF38Q9H0F5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.9□□□□□ -1.78
RNF38Q9H0F5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF38Q9H0F5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF38Q9H0F5 RPS4XP3-201ENST00000398541 413 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 YME1L1P1-201ENST00000429435 297 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 RPL23AP22-201ENST00000437556 453 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC079354.2-201ENST00000453523 154 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC084357.1-201ENST00000473404 255 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC106707.2-201ENST00000484182 374 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC087190.1-201ENST00000484462 480 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC107032.1-201ENST00000485945 480 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 RNU6-789P-201ENST00000517105 102 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC136601.2-201ENST00000604356 474 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC004792.1-201ENST00000614523 137 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 AC002076.2-201ENST00000617362 122 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF38Q9H0F5 FAM35BP-202ENST00000497389 3337 ntBASIC3.9□□□□□ -1.79
RNF38Q9H0F5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF38Q9H0F5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF38Q9H0F5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms