Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 RNU6-639P-201ENST00000384074 107 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 SNORD15B-201ENST00000384714 146 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 DAP3P1-201ENST00000441522 278 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 HMGN2P16-201ENST00000456802 261 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AL049830.2-201ENST00000480072 201 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 RNU6-703P-201ENST00000516946 107 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AC109446.1-201ENST00000566172 220 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 CPDP1-201ENST00000579660 283 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AP000787.2-201ENST00000604432 568 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AP001836.1-201ENST00000604675 523 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 FTX_3.1-201ENST00000610451 147 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AC006386.2-201ENST00000624491 75 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AC012005.1-201ENST00000624575 75 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 U2.21-201ENST00000637295 81 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 MTND4P1-201ENST00000457501 1466 ntBASIC3.2□□□□□ -1.9
CIPCQ9C0C6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CIPCQ9C0C6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 Y_RNA.145-201ENST00000363527 102 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 RNU6-596P-201ENST00000365395 98 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 RNU6-827P-201ENST00000365553 106 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 Y_RNA.496-201ENST00000384444 101 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 U3.26-201ENST00000391236 204 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 MCFD2P1-201ENST00000417812 300 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AL117339.3-201ENST00000418733 162 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 COTL1P1-201ENST00000422309 375 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AC022018.1-201ENST00000430685 241 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AL031274.1-201ENST00000450334 232 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 RPL21P104-201ENST00000464143 478 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 RN7SL442P-201ENST00000473804 320 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 RNU6-1137P-201ENST00000517073 99 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 RNU6-699P-201ENST00000517081 110 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 ZNF192P1-203ENST00000565888 810 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AL161629.2-201ENST00000615347 275 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 AC091925.1-201ENST00000623204 462 ntBASIC3.19□□□□□ -1.9
CIPCQ9C0C6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.19□□□□□ -1.9
CIPCQ9C0C6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 RNU6-490P-201ENST00000362985 107 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 Z98749.2-208ENST00000381646 500 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 SNORA41-201ENST00000384675 132 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 MIR34A-201ENST00000385130 110 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 HSPE1P26-201ENST00000405341 275 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 RNU6-174P-201ENST00000410406 106 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 RNU2-37P-201ENST00000410695 177 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC113618.1-201ENST00000416747 285 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AP001486.1-201ENST00000463339 476 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC008571.1-201ENST00000467232 300 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC022493.2-201ENST00000506122 481 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 RNU1-103P-201ENST00000516502 125 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 H3F3AP1-201ENST00000559984 334 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 CYCSP39-201ENST00000565821 309 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 LARP7P3-201ENST00000579888 337 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC008121.1-201ENST00000603244 268 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC136443.5-201ENST00000603741 370 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC007485.1-201ENST00000616755 206 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AC027309.3-201ENST00000623419 351 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AP001148.1-201ENST00000624124 2359 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 AF127577.6-201ENST00000623352 2191 ntBASIC3.18□□□□□ -1.9
CIPCQ9C0C6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CIPCQ9C0C6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms