Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AL442163.3-201ENST00000554110 156 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AC005476.1-201ENST00000554427 397 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AC002545.1-201ENST00000592511 181 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AC009314.1-201ENST00000603871 304 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 AL161798.1-201ENST00000604630 131 ntBASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTNAP4Q9C0A0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-37P-201ENST00000362692 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.81-201ENST00000362997 102 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 SNORD27-201ENST00000363981 72 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-11P-201ENST00000364234 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-7-201ENST00000364784 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.297-201ENST00000364950 91 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-8-201ENST00000365467 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-25P-201ENST00000383873 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1-201ENST00000383898 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-48P-201ENST00000384161 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-36P-201ENST00000384172 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-4P-201ENST00000384205 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-5P-201ENST00000384238 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-3P-201ENST00000384314 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-16P-201ENST00000384385 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-15P-201ENST00000384534 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-2-201ENST00000384627 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-29P-201ENST00000384637 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-9-201ENST00000384776 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 LAP3P1-201ENST00000403648 294 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1140P-201ENST00000410517 106 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-121P-201ENST00000410525 99 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 MYL8P-204ENST00000431574 518 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AL513124.1-201ENST00000450410 614 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AL139109.1-201ENST00000455491 297 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AC010469.1-201ENST00000463864 576 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNA5SP154-201ENST00000516193 111 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AC004024.1-201ENST00000549244 247 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AL451007.1-201ENST00000595491 289 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AC073657.2-201ENST00000605661 303 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNA5SP108-201ENST00000605921 117 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-6P-201ENST00000606623 107 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AC009318.2-201ENST00000610917 651 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AL162274.2-201ENST00000614406 332 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTNAP4Q9C0A0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CNTNAP4Q9C0A0 AC068254.2-201ENST00000623938 3577 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 Y_RNA.439-201ENST00000384119 94 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 MRPL35P1-201ENST00000404272 572 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 RNU2-33P-201ENST00000410344 192 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 RNA5SP494-201ENST00000410653 129 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 RNU6-130P-201ENST00000411112 103 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 RPL21P38-201ENST00000418090 167 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 MTND3P9-201ENST00000429526 346 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AL627311.1-201ENST00000431514 115 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC109925.1-201ENST00000478069 331 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC087190.1-201ENST00000484462 480 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC107032.1-201ENST00000485945 480 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC104581.2-201ENST00000572227 430 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 BRDTP1-201ENST00000605735 677 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC006386.2-201ENST00000624491 75 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 AC012005.1-201ENST00000624575 75 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 LINC02555-201ENST00000563933 1951 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.33□□□□□ -1.72
CNTNAP4Q9C0A0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 Y_RNA.105-201ENST00000363182 111 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 RNA5SP197-201ENST00000363357 119 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 SNORA80A-201ENST00000363922 136 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 RNU6-384P-201ENST00000364900 104 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 MIR93-201ENST00000385024 80 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 MIR190B-201ENST00000401119 79 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 RPS29P13-201ENST00000402041 169 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 IFNWP4-201ENST00000453148 294 ntBASIC4.32□□□□□ -1.72
CNTNAP4Q9C0A0 AC084357.1-201ENST00000473404 255 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms