Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 AL132838.2-201ENST00000492041 314 ntBASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-1061P-201ENST00000516530 99 ntBASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 CYCSP23-201ENST00000519781 313 ntBASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 AC053481.4-201ENST00000583164 216 ntBASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 SNRPGP15-201ENST00000600149 222 ntBASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 AL138963.2-201ENST00000605137 226 ntBASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 AL121890.5-201ENST00000620848 304 ntBASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.58□□□□□ -1.68
CNTNAP3Q9BZ76 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 Y_RNA.293-201ENST00000364908 93 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-969P-201ENST00000383900 105 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 MT-TT-201ENST00000387460 66 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 ELOCP21-201ENST00000412558 336 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AC114755.2-201ENST00000413520 361 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 RPL19P16-201ENST00000433839 588 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 RPL30P12-201ENST00000474666 353 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 Y_RNA.692-201ENST00000516627 105 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AC016256.1-201ENST00000547971 354 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AC131238.1-201ENST00000617135 328 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 SNORA43.4-201ENST00000629559 138 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AC012442.3-202ENST00000636742 206 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 SALL4P2-201ENST00000423288 2910 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 AC073346.2-201ENST00000624724 2058 ntBASIC4.57□□□□□ -1.68
CNTNAP3Q9BZ76 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC010329.5-201ENST00000623497 2174 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 MIR218-2-201ENST00000385006 110 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 MIR526A2-201ENST00000390198 65 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-1228P-201ENST00000391014 107 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AL355497.1-201ENST00000406262 551 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 RPL26P27-201ENST00000414397 437 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 RPL23AP93-201ENST00000440847 484 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC004386.2-201ENST00000441858 148 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AL133547.1-201ENST00000448546 220 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 snoU13.4-201ENST00000458916 104 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC146507.2-201ENST00000460608 476 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 KC877373.1-201ENST00000479066 408 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-436P-201ENST00000516171 114 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC005255.1-201ENST00000593748 216 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC108738.1-201ENST00000603703 237 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC090132.2-201ENST00000615881 347 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 MIR6875-201ENST00000617506 72 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 MIR3653-201ENST00000625572 110 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC140479.6-201ENST00000633535 357 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
CNTNAP3Q9BZ76 LINC01355-201ENST00000566551 5444 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RNA5SP119-201ENST00000362715 117 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 Y_RNA.114-201ENST00000363265 113 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 U3.9-201ENST00000363823 204 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-873P-201ENST00000363833 107 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 RNU6-72P-201ENST00000384285 79 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 Y_RNA.498-201ENST00000384460 102 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 SNORD56.6-201ENST00000384569 71 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 MIR548A1-201ENST00000385041 97 ntBASIC4.55□□□□□ -1.68
CNTNAP3Q9BZ76 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms