Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AL358453.1-201ENST00000422522 250 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC092423.1-201ENST00000430165 186 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 MTCO3P29-201ENST00000432119 779 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RPL39P29-201ENST00000447779 157 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RN7SKP210-201ENST00000459176 261 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 TRBV12-2-201ENST00000489763 344 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RNU4-77P-201ENST00000516692 156 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RNU7-4P-201ENST00000516961 62 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 HSPE1P4-201ENST00000550617 308 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 MIR5685-201ENST00000579080 79 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 MIR4680-201ENST00000580906 66 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RPS15AP11-201ENST00000594193 385 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 RNU6-91P-201ENST00000607774 107 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 MIR6500-201ENST00000622700 86 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 CR392039.5-201ENST00000623201 510 ntBASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM55Q9BYV6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 MIR625-201ENST00000385047 85 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 RNA5SP354-201ENST00000391247 136 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 RNU2-23P-201ENST00000410545 195 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC113618.1-201ENST00000416747 285 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC007098.1-201ENST00000420122 367 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC009414.1-201ENST00000427200 443 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 RPL30P1-201ENST00000488676 339 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC104564.1-201ENST00000493028 407 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 RNU6-1137P-201ENST00000517073 99 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 MIR7151-201ENST00000617477 60 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AL606534.2-204ENST00000635008 178 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC110079.1-202ENST00000635213 138 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AC012442.3-202ENST00000636742 206 ntBASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM55Q9BYV6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 Y_RNA.39-201ENST00000362620 98 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 Y_RNA.145-201ENST00000363527 102 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 RNU6-799P-201ENST00000363567 107 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 RNU4-42P-201ENST00000364738 142 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 Y_RNA.504-201ENST00000384481 104 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 RN7SKP61-201ENST00000410642 295 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AC002075.2-201ENST00000425207 252 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 GNAI2P1-201ENST00000541815 315 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AC120057.2-201ENST00000571520 271 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AL137843.1-201ENST00000605078 385 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 SNORD58B-201ENST00000607313 66 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 SCARNA4-201ENST00000629045 128 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AC002543.1-201ENST00000299783 1954 ntBASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TRIM55Q9BYV6 AC005592.1-201ENST00000566527 1640 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 RNA5SP124-201ENST00000362739 110 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 Y_RNA.80-201ENST00000362996 102 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 RNA5SP387-201ENST00000364226 106 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 RNU4-9P-201ENST00000364951 139 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 RNU6-142P-201ENST00000384019 107 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 SNORA12.2-201ENST00000391040 156 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 MTCYBP2-201ENST00000407745 171 ntBASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM55Q9BYV6 AL691449.1-201ENST00000426570 421 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms