Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC007435.1-201ENST00000421086 415 ntBASIC0.39□□□□□ -2.35
SCAPERQ9BY12 ELOCP14-201ENST00000428070 331 ntBASIC0.39□□□□□ -2.35
SCAPERQ9BY12 ELOCP7-201ENST00000439968 331 ntBASIC0.39□□□□□ -2.35
SCAPERQ9BY12 AC011005.2-201ENST00000487324 359 ntBASIC0.39□□□□□ -2.35
SCAPERQ9BY12 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.39□□□□□ -2.35
SCAPERQ9BY12 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.39□□□□□ -2.35
SCAPERQ9BY12 CLIC4P2-201ENST00000601934 717 ntBASIC0.39□□□□□ -2.35
SCAPERQ9BY12 Z82243.1-201ENST00000609432 473 ntBASIC0.39□□□□□ -2.35
SCAPERQ9BY12 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.39□□□□□ -2.35
SCAPERQ9BY12 RNU5E-8P-201ENST00000363502 116 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AC119751.3-201ENST00000399720 670 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.38□□□□□ -2.35
SCAPERQ9BY12 UBE2V1P8-201ENST00000437166 265 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 OR2AQ1P-201ENST00000451972 200 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.38□□□□□ -2.35
SCAPERQ9BY12 RNU6-678P-201ENST00000516832 109 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 MTCO2P15-201ENST00000532655 656 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 TRAV32-201ENST00000553993 340 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.38□□□□□ -2.35
SCAPERQ9BY12 BNIP3P16-201ENST00000589779 534 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AC008751.2-201ENST00000597885 980 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 RPL30P11-203ENST00000598995 310 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AC006213.5-201ENST00000619673 288 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.38□□□□□ -2.35
SCAPERQ9BY12 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SCAPERQ9BY12 ZNF849P-201ENST00000594711 1566 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 MTCO1P18-201ENST00000455518 1419 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 RNU6-546P-201ENST00000383991 107 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 RNU6-360P-201ENST00000390944 104 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AL592310.1-201ENST00000414330 671 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.38□□□□□ -2.35
SCAPERQ9BY12 RNU6-840P-201ENST00000517275 65 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 BPTFP1-201ENST00000579209 492 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 AL355598.1-201ENST00000604169 202 ntBASIC0.38□□□□□ -2.35
SCAPERQ9BY12 RNU6-112P-201ENST00000363599 104 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 RNU6-105P-201ENST00000363909 104 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 MIR329-2-201ENST00000385029 84 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.37□□□□□ -2.35
SCAPERQ9BY12 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.37□□□□□ -2.35
SCAPERQ9BY12 RNU6-581P-201ENST00000516214 105 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 RNU6-528P-201ENST00000516926 100 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.37□□□□□ -2.35
SCAPERQ9BY12 IGJP1-201ENST00000522682 475 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SCAPERQ9BY12 AL512310.8-201ENST00000550183 120 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.37□□□□□ -2.35
SCAPERQ9BY12 MIR5190-201ENST00000581537 80 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 AC146944.4-201ENST00000602697 718 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 AC007792.1-201ENST00000623023 402 ntBASIC0.37□□□□□ -2.35
SCAPERQ9BY12 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.36□□□□□ -2.35
SCAPERQ9BY12 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SCAPERQ9BY12 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 Y_RNA.245-201ENST00000364493 95 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 MIR19B1-201ENST00000384829 87 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 AL161935.2-201ENST00000414627 60 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 AL451054.2-201ENST00000420896 202 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SCAPERQ9BY12 CECR9-201ENST00000453421 199 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.36□□□□□ -2.35
SCAPERQ9BY12 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 RNU6-416P-201ENST00000516265 103 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.36□□□□□ -2.35
SCAPERQ9BY12 MRPS36P5-201ENST00000551909 298 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.36□□□□□ -2.35
SCAPERQ9BY12 AC115989.2-201ENST00000578640 563 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 RNU6-91P-201ENST00000607774 107 ntBASIC0.36□□□□□ -2.35
SCAPERQ9BY12 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SCAPERQ9BY12 Y_RNA.255-201ENST00000364581 97 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
SCAPERQ9BY12 AC114482.1-201ENST00000418010 247 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 AC019178.2-201ENST00000423595 505 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 RPL30P1-201ENST00000488676 339 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.35□□□□□ -2.35
SCAPERQ9BY12 RNU5B-3P-201ENST00000516601 115 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 RNU6-703P-201ENST00000516946 107 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 AL590705.4-201ENST00000532209 134 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.35□□□□□ -2.35
SCAPERQ9BY12 AC004853.1-201ENST00000604902 698 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 AL590396.4-201ENST00000636779 956 ntBASIC0.35□□□□□ -2.35
SCAPERQ9BY12 Y_RNA.99-201ENST00000363138 105 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 SNORD114-24-201ENST00000365029 72 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
SCAPERQ9BY12 MTND1P28-201ENST00000435623 950 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 AC013267.1-201ENST00000458227 267 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 BET1P1-201ENST00000482276 359 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 MTCO1P31-201ENST00000506355 492 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.34□□□□□ -2.36
SCAPERQ9BY12 RN7SKP88-201ENST00000516847 250 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.34□□□□□ -2.36
SCAPERQ9BY12 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.34□□□□□ -2.36
SCAPERQ9BY12 AP003465.2-201ENST00000602571 373 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 AL355802.4-201ENST00000607635 548 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 7SK.8-201ENST00000612110 250 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 7SK.11-201ENST00000615477 250 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 7SK.13-201ENST00000622040 250 ntBASIC0.34□□□□□ -2.36
SCAPERQ9BY12 RNU6-658P-201ENST00000384606 106 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 RPS26P5-201ENST00000418544 335 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AC092634.6-201ENST00000418558 192 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 SNX2P2-201ENST00000424553 323 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms