Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AC021451.1-201ENST00000523498 1129 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AL731537.2-201ENST00000561565 951 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 MIR5708-201ENST00000579723 85 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 MIR4298-201ENST00000584380 73 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 VN1R87P-201ENST00000596706 487 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 BNIP3P30-201ENST00000601184 574 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AC130454.1-201ENST00000622948 401 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AC027335.2-201ENST00000624030 375 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 AL359757.2-201ENST00000624309 274 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 PCMTD1P7-201ENST00000634506 357 ntBASIC0.57□□□□□ -2.32
LIMD2Q9BT23 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LIMD2Q9BT23 RNU4-38P-201ENST00000364472 129 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 MIR146A-201ENST00000385201 99 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 MIR100-201ENST00000385259 80 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 UBE2V1P10-201ENST00000414685 269 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 TIMM9P2-201ENST00000419324 266 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 MRPS36P1-201ENST00000421291 307 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 FO393414.1-201ENST00000428697 1184 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AL365400.1-201ENST00000431854 640 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AL606517.1-201ENST00000446914 387 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AL353752.1-201ENST00000454946 260 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AC114982.1-201ENST00000469402 321 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 RNU6-965P-201ENST00000516721 96 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 RNU6-64P-201ENST00000517119 105 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AC104417.1-201ENST00000523974 751 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 DEFB130C-202ENST00000530001 230 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AL356057.1-201ENST00000533798 831 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 CYP3A52P-201ENST00000563326 91 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AC104072.1-201ENST00000568817 668 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AC136932.1-201ENST00000574771 208 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 MIR1273C-201ENST00000578669 77 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 MIR4653-201ENST00000585107 83 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AC022022.2-201ENST00000602989 360 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 SNORD114-21-201ENST00000606412 72 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 MIR6857-201ENST00000613267 93 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AL590240.4-201ENST00000616908 390 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 MIR8063-201ENST00000621930 81 ntBASIC0.56□□□□□ -2.32
LIMD2Q9BT23 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
LIMD2Q9BT23 Y_RNA.332-201ENST00000365271 113 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 RPL21P90-201ENST00000415692 466 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AL606490.4-201ENST00000423117 127 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 RPS4XP11-201ENST00000446897 772 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 RPS27P1-201ENST00000450552 247 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AC112198.4-201ENST00000515450 351 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 RNU6-1092P-201ENST00000516955 87 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AL359821.1-201ENST00000605519 182 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AL159153.1-201ENST00000619688 317 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 MIR8065-201ENST00000620577 100 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
LIMD2Q9BT23 AC099654.5-201ENST00000636479 350 ntBASIC0.55□□□□□ -2.32
LIMD2Q9BT23 HSBP1P2-201ENST00000299671 229 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 MIR337-201ENST00000362281 93 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 RNY1P10-201ENST00000363268 113 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 SNORD114-2-201ENST00000363953 78 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 Y_RNA.408-201ENST00000383987 102 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 RNU6-1065P-201ENST00000384513 106 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC006461.1-201ENST00000412637 326 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 POLR2J4-204ENST00000418424 324 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AL953862.1-201ENST00000423016 168 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 SNRPEP7-201ENST00000438350 220 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 HSPE1P9-201ENST00000440046 311 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
LIMD2Q9BT23 RNU6-953P-201ENST00000459154 107 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 AC130509.1-201ENST00000464158 433 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 TOMM22P6-201ENST00000465035 409 ntBASIC0.54□□□□□ -2.32
LIMD2Q9BT23 COX6CP14-201ENST00000469580 174 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms