Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 PRPS1P1-201ENST00000445305 876 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 MTND1P1-201ENST00000445453 368 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AC073415.1-201ENST00000449240 153 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 RNU7-26P-201ENST00000458980 63 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 RPL22P13-201ENST00000493291 347 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AC023141.11-201ENST00000508864 202 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AP001893.2-201ENST00000526949 202 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AL137161.1-201ENST00000532231 390 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AC064807.4-201ENST00000607201 407 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AC046143.2-201ENST00000609789 160 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AC068792.1-201ENST00000621354 417 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 SCARNA4-202ENST00000625402 129 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 MTND4P27-201ENST00000450813 1354 ntBASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCM2Q9BSQ5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 RNU6-1322P-201ENST00000364309 107 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 SNORA6-201ENST00000384033 151 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 SNORD116-20-201ENST00000384529 92 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AL445529.1-201ENST00000398713 389 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 CALM2P3-201ENST00000400429 449 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AL606923.1-201ENST00000406616 190 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 RAP1BP3-201ENST00000407180 549 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 RNU2-3P-201ENST00000410144 191 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AF274854.1-201ENST00000413236 615 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 CYCSP33-201ENST00000414485 327 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 HMGB1P31-201ENST00000437242 427 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 DNAJC19P4-201ENST00000440115 345 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 PSPHP1-201ENST00000450062 261 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AC112771.1-201ENST00000463581 102 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 MED28P2-201ENST00000475771 317 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 RNA5SP112-201ENST00000515937 99 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 SCARNA3-201ENST00000517097 143 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 MIR5583-1-201ENST00000580941 59 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 MIR4435-1-201ENST00000582552 80 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AL021997.1-201ENST00000605757 193 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AC012557.2-201ENST00000605919 418 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AC245884.12-201ENST00000615364 59 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 RMST_4.1-201ENST00000616886 107 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 AL354685.2-201ENST00000448218 1447 ntBASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCM2Q9BSQ5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 Y_RNA.41-201ENST00000362646 102 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 RNU6-942P-201ENST00000363002 107 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 SNORA38-201ENST00000363946 132 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 Y_RNA.481-201ENST00000384373 102 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 SNORA16.2-201ENST00000390991 127 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC138623.1-201ENST00000418060 216 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 BX276092.3-201ENST00000424182 230 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AL365400.1-201ENST00000431854 640 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC016691.1-201ENST00000441321 413 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 FDX1P2-201ENST00000450769 375 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC006026.2-201ENST00000457376 180 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC009646.1-201ENST00000510455 318 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 RNU2-69P-201ENST00000516061 100 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 SNORA40.12-201ENST00000516329 111 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 RNU6-314P-201ENST00000516574 104 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC104383.1-201ENST00000530297 370 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC027807.1-201ENST00000559921 996 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC105137.2-201ENST00000569073 466 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC009127.3-201ENST00000570531 403 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 RPS15AP11-201ENST00000594193 385 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AP001330.5-201ENST00000607176 411 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AL359880.1-201ENST00000621879 266 ntBASIC2.31□□□□□ -2.04
CCM2Q9BSQ5 AC022418.1-201ENST00000624118 445 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms