Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-682P-201ENST00000363843 106 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-125P-201ENST00000384505 107 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.569-201ENST00000384749 103 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 MIR548I2-201ENST00000408348 149 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 AL390729.2-201ENST00000416137 156 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 COX6CP10-201ENST00000416832 224 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 TMSB4XP3-201ENST00000445144 114 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 PHBP16-201ENST00000446318 950 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 AC125238.1-201ENST00000448842 249 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 AF186996.7-201ENST00000492781 209 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 AC093840.1-201ENST00000511599 336 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP519-201ENST00000516480 119 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 RN7SKP21-201ENST00000516503 220 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 RN7SKP49-201ENST00000516675 260 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 MIR6716-201ENST00000613413 80 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 HAUS6P2-201ENST00000433254 2404 ntBASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM56Q9BRZ2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AF117829.1-206ENST00000621883 3802 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP388-201ENST00000362584 119 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-884P-201ENST00000363889 107 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RNA5SP509-201ENST00000364577 119 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RNU1-100P-201ENST00000365255 165 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RNY4P28-201ENST00000365281 93 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.506-201ENST00000384494 102 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 SNORA37-201ENST00000384504 129 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 SNORA1.3-201ENST00000384676 136 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 SNORA11F-201ENST00000408237 128 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RN7SKP53-201ENST00000411337 315 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC096638.1-201ENST00000444678 216 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RN7SL98P-201ENST00000462271 300 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC073901.1-201ENST00000462471 408 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RN7SL691P-201ENST00000494487 301 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC097462.2-201ENST00000504623 481 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 RNU7-110P-201ENST00000516891 62 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC140479.6-201ENST00000633535 357 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 AC002546.1-201ENST00000588041 2504 ntBASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM56Q9BRZ2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AC018529.3-201ENST00000624212 2254 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-137P-201ENST00000363680 108 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.292-201ENST00000364904 97 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.590-201ENST00000410140 107 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-1140P-201ENST00000410517 106 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 YPEL5P1-201ENST00000419731 367 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 RPL23AP95-201ENST00000426806 265 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AC243964.1-201ENST00000441814 261 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AC011276.1-201ENST00000469688 323 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AC109925.1-201ENST00000478069 331 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 RPS29P19-201ENST00000479709 171 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 VWA8P1-201ENST00000510889 176 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.679-201ENST00000516416 91 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 Y_RNA.683-201ENST00000516508 93 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 RNU6-861P-201ENST00000516745 106 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 HIGD1AP1-201ENST00000550979 275 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 MIR1254-2-201ENST00000579553 63 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 AC011944.2-201ENST00000624440 683 ntBASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRIM56Q9BRZ2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms