Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 AL591419.1-201ENST00000427423 339 ntBASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 AC016700.2-201ENST00000446011 156 ntBASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 AL500522.2-201ENST00000448562 343 ntBASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 HSPE1P25-201ENST00000455484 251 ntBASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-703P-201ENST00000516946 107 ntBASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 AC107016.1-201ENST00000550463 337 ntBASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 CYCSP39-201ENST00000565821 309 ntBASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ZKSCAN3Q9BRR0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 Y_RNA.44-201ENST00000362676 108 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 MIR32-201ENST00000384965 70 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 MIR153-2-201ENST00000385225 87 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU1-139P-201ENST00000391307 165 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC017079.2-201ENST00000416102 485 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC004552.1-201ENST00000419089 348 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 EIF1P2-201ENST00000428233 350 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RPS15AP7-201ENST00000439294 405 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AL353748.1-201ENST00000440753 474 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC010469.1-201ENST00000463864 576 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RPS26P3-201ENST00000470205 348 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC090543.2-201ENST00000483963 348 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC004057.1-201ENST00000485827 348 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-1114P-201ENST00000516022 107 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-1212P-201ENST00000517023 104 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-1183P-201ENST00000517054 60 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AP002392.1-201ENST00000537692 208 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 SNORA62.6-201ENST00000606322 83 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 AL353743.1-202ENST00000431724 1695 ntBASIC4.45□□□□□ -1.7
ZKSCAN3Q9BRR0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-879P-201ENST00000364328 108 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 SNORA7.2-201ENST00000364446 145 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-140P-201ENST00000384566 108 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 MIR554-201ENST00000384874 96 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-1245P-201ENST00000411130 106 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 AC092047.1-201ENST00000424997 240 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 TRBV12-2-201ENST00000489763 344 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 UBE2CP3-201ENST00000502715 450 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 LINC00933-203ENST00000559812 219 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 MIR3910-1-201ENST00000580936 111 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 AC037487.3-201ENST00000606668 112 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 SNORD113-5-201ENST00000607261 78 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 ZNF826P-207ENST00000622273 1910 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 AL136964.1-201ENST00000622038 2990 ntBASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZKSCAN3Q9BRR0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-326P-201ENST00000365480 107 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-926P-201ENST00000384075 107 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-318P-201ENST00000384283 103 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 Y_RNA.504-201ENST00000384481 104 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 UBA52P6-201ENST00000399822 382 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 SNORA57.3-201ENST00000411095 141 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AC005002.2-201ENST00000438228 269 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AL451050.1-201ENST00000450126 415 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 MTATP6P7-201ENST00000453315 681 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 RPL30P1-201ENST00000488676 339 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 Y_RNA.703-201ENST00000516846 111 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AC024405.2-202ENST00000532731 184 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AC008011.1-201ENST00000545989 227 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 ZNF192P1-203ENST00000565888 810 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 MIR1254-2-201ENST00000579553 63 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 Z83818.1-201ENST00000603584 150 ntBASIC4.43□□□□□ -1.7
ZKSCAN3Q9BRR0 AL137849.1-201ENST00000604767 169 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms