Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PGBD4P6-201ENST00000421501 610 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.33□□□□□ -2.04
VGLL1Q99990 AC098614.2-201ENST00000426040 255 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.33□□□□□ -2.04
VGLL1Q99990 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.33□□□□□ -2.04
VGLL1Q99990 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.33□□□□□ -2.04
VGLL1Q99990 HIGD1AP2-201ENST00000446367 280 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 FTH1P25-201ENST00000447665 469 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 AC013470.1-201ENST00000453438 462 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RPL30P15-201ENST00000457129 321 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 AL163540.1-201ENST00000485382 386 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
VGLL1Q99990 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.33□□□□□ -2.04
VGLL1Q99990 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.33□□□□□ -2.04
VGLL1Q99990 RN7SKP43-201ENST00000516173 320 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNA5SP384-201ENST00000516615 116 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 Y_RNA.708-201ENST00000516950 96 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-56P-201ENST00000516986 93 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.33□□□□□ -2.04
VGLL1Q99990 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.33□□□□□ -2.04
VGLL1Q99990 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 TRAV32-201ENST00000553993 340 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 AMZ2P1-203ENST00000565833 850 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 MIR3158-1-201ENST00000583596 81 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 CYP2C61P-201ENST00000604072 290 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 RNU6-6P-201ENST00000606623 107 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 PART1_1.1-201ENST00000611761 217 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 AC006133.1-201ENST00000617106 264 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.33□□□□□ -2.04
VGLL1Q99990 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.33□□□□□ -2.04
VGLL1Q99990 ZNF807-201ENST00000328088 1707 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.33□□□□□ -2.04
VGLL1Q99990 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VGLL1Q99990 MTND5P10-201ENST00000603719 1809 ntBASIC2.33□□□□□ -2.04
VGLL1Q99990 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VGLL1Q99990 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VGLL1Q99990 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.32□□□□□ -2.04
VGLL1Q99990 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.32□□□□□ -2.04
VGLL1Q99990 AC103988.1-201ENST00000566382 2177 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VGLL1Q99990 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VGLL1Q99990 RNU6-1040P-201ENST00000383974 107 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RNU6-890P-201ENST00000384121 107 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RNU6-738P-201ENST00000384531 106 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 MIR518D-201ENST00000385014 87 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 MIR10A-201ENST00000385043 110 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RNU6-308P-201ENST00000390957 107 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 SNORA75.6-201ENST00000391318 127 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RPL21P75-201ENST00000396599 483 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AL445529.1-201ENST00000398713 389 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RPL21P28-201ENST00000401418 483 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 SNORD88.1-201ENST00000408684 91 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RNA5SP274-201ENST00000410484 108 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AL030996.1-201ENST00000411430 235 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AL117339.3-201ENST00000418733 162 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VGLL1Q99990 AC018865.2-201ENST00000423631 129 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AC236972.1-201ENST00000433225 199 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RPL21P39-201ENST00000463605 483 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.32□□□□□ -2.04
VGLL1Q99990 RPL23AP45-201ENST00000476406 468 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RPS27AP9-201ENST00000477681 438 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RN7SL293P-201ENST00000481765 281 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AC087190.1-201ENST00000484462 480 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RPL32P34-201ENST00000486380 400 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RN7SL20P-201ENST00000488827 297 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AC093591.1-201ENST00000491435 481 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RPL21P129-201ENST00000491732 478 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RPL21P16-201ENST00000495531 483 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 RNU1-54P-201ENST00000517181 120 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 SNRPGP18-201ENST00000553000 214 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.32□□□□□ -2.04
VGLL1Q99990 H3F3AP1-201ENST00000559984 334 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AC023043.3-201ENST00000593113 385 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AL360085.1-201ENST00000604713 532 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AL160281.1-201ENST00000605307 311 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AL121917.1-203ENST00000605534 577 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VGLL1Q99990 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.32□□□□□ -2.04
VGLL1Q99990 AC022336.2-201ENST00000568966 2538 ntBASIC2.32□□□□□ -2.04
VGLL1Q99990 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
VGLL1Q99990 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
VGLL1Q99990 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VGLL1Q99990 SNORA33.2-201ENST00000365413 134 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 SNORA22B-201ENST00000383876 138 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 Y_RNA.445-201ENST00000384168 102 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 Y_RNA.463-201ENST00000384271 102 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 MIR517A-201ENST00000385001 87 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 U3.19-201ENST00000390893 196 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 AL591034.1-201ENST00000407447 340 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 RN7SKP27-201ENST00000410684 333 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 MTND2P23-201ENST00000422990 651 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 AL133396.1-201ENST00000432048 687 ntBASIC2.31□□□□□ -2.04
VGLL1Q99990 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.31□□□□□ -2.04
VGLL1Q99990 AC098831.1-201ENST00000440661 216 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms