Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.35□□□□□ -1.55
ARXQ96QS3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.35□□□□□ -1.55
ARXQ96QS3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.35□□□□□ -1.55
ARXQ96QS3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ARXQ96QS3 AC020895.1-201ENST00000595362 272 ntBASIC5.35□□□□□ -1.55
ARXQ96QS3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.35□□□□□ -1.55
ARXQ96QS3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ARXQ96QS3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
ARXQ96QS3 LINC02471-203ENST00000641941 4752 ntBASIC5.35□□□□□ -1.55
ARXQ96QS3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ARXQ96QS3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.35□□□□□ -1.55
ARXQ96QS3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.35□□□□□ -1.55
ARXQ96QS3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.35□□□□□ -1.55
ARXQ96QS3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ARXQ96QS3 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 RNU6-384P-201ENST00000364900 104 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 RNU6-213P-201ENST00000384051 104 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 SNORD66.1-201ENST00000391230 76 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 RN7SKP156-201ENST00000410308 342 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 AC002075.2-201ENST00000425207 252 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.34□□□□□ -1.55
ARXQ96QS3 HLA-N-201ENST00000437516 135 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 AC073910.1-201ENST00000445047 438 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 HMGN1P11-201ENST00000508668 303 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 Y_RNA.687-201ENST00000516558 91 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 ACA59.2-201ENST00000517061 156 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.34□□□□□ -1.55
ARXQ96QS3 AC040926.1-201ENST00000530195 238 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 TRAV32-201ENST00000553993 340 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 AL139395.1-201ENST00000603662 160 ntBASIC5.34□□□□□ -1.55
ARXQ96QS3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.34□□□□□ -1.55
ARXQ96QS3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.34□□□□□ -1.55
ARXQ96QS3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.34□□□□□ -1.55
ARXQ96QS3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ARXQ96QS3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.34□□□□□ -1.55
ARXQ96QS3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ARXQ96QS3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
ARXQ96QS3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.33□□□□□ -1.56
ARXQ96QS3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.33□□□□□ -1.56
ARXQ96QS3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ARXQ96QS3 RNU4-42P-201ENST00000364738 142 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 RNU1-100P-201ENST00000365255 165 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 RNU1-44P-201ENST00000384453 163 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 MIR518D-201ENST00000385014 87 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.33□□□□□ -1.56
ARXQ96QS3 RNU6-1143P-201ENST00000516125 104 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 CBX3P8-201ENST00000532412 525 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.33□□□□□ -1.56
ARXQ96QS3 VN1R91P-201ENST00000594377 169 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 AL391813.1-201ENST00000603098 260 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 AC008121.1-201ENST00000603244 268 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 AC091152.3-201ENST00000604227 325 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 AL121917.1-203ENST00000605534 577 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.33□□□□□ -1.56
ARXQ96QS3 MIR8062-201ENST00000621515 85 ntBASIC5.33□□□□□ -1.56
ARXQ96QS3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ARXQ96QS3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ARXQ96QS3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ARXQ96QS3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ARXQ96QS3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
ARXQ96QS3 RPL9P7-201ENST00000330965 580 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 Y_RNA.106-201ENST00000363189 100 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RNU6-379P-201ENST00000363813 104 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RNU4-50P-201ENST00000364361 141 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RNU6-26P-201ENST00000383985 107 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RNU6-748P-201ENST00000384648 107 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RNVU1-14-201ENST00000384770 164 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 MIR921-201ENST00000401133 56 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 MTCO3P19-201ENST00000415864 321 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 AC007098.1-201ENST00000420122 367 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 AL513043.1-201ENST00000439124 535 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.32□□□□□ -1.56
ARXQ96QS3 RPL9P9-202ENST00000466501 579 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RPL23AP14-201ENST00000468281 468 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RPS29P2-201ENST00000479278 136 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RNU5F-8P-201ENST00000515941 111 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 AC006064.5-201ENST00000541782 248 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.32□□□□□ -1.56
ARXQ96QS3 GNRHR2P1-201ENST00000555315 631 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 CPDP1-201ENST00000579660 283 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.32□□□□□ -1.56
ARXQ96QS3 MIR5188-201ENST00000583467 113 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
ARXQ96QS3 AC107871.2-201ENST00000612894 502 ntBASIC5.32□□□□□ -1.56
ARXQ96QS3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ARXQ96QS3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ARXQ96QS3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.31□□□□□ -1.56
ARXQ96QS3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.31□□□□□ -1.56
ARXQ96QS3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ARXQ96QS3 SNORD74.4-201ENST00000364129 80 ntBASIC5.31□□□□□ -1.56
ARXQ96QS3 Y_RNA.276-201ENST00000364732 109 ntBASIC5.31□□□□□ -1.56
ARXQ96QS3 RNU5E-7P-201ENST00000365290 117 ntBASIC5.31□□□□□ -1.56
ARXQ96QS3 RNU6-700P-201ENST00000391043 107 ntBASIC5.31□□□□□ -1.56
ARXQ96QS3 RNA5SP104-201ENST00000410989 118 ntBASIC5.31□□□□□ -1.56
ARXQ96QS3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.31□□□□□ -1.56
ARXQ96QS3 AL691449.1-201ENST00000426570 421 ntBASIC5.31□□□□□ -1.56
ARXQ96QS3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.31□□□□□ -1.56
ARXQ96QS3 DYNLT3P2-201ENST00000442517 295 ntBASIC5.31□□□□□ -1.56
ARXQ96QS3 PCNPP5-201ENST00000452246 481 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms