Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC090096.1-201ENST00000489168 390 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 RNU2-53P-201ENST00000516257 147 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC009812.2-201ENST00000517657 457 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AP005597.4-201ENST00000526762 229 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AP003033.1-201ENST00000527244 415 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AL133241.1-201ENST00000556832 487 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 MIR5194-201ENST00000582634 120 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC146944.4-201ENST00000602697 718 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC009314.1-201ENST00000603871 304 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC104458.1-201ENST00000608243 463 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC005046.1-201ENST00000608515 625 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC092794.1-201ENST00000612734 582 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AC007014.2-201ENST00000615581 479 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 AL159153.1-201ENST00000619688 317 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 MIR5739-201ENST00000619803 80 ntBASIC2.61□□□□□ -1.99
CMTM3Q96MX0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CMTM3Q96MX0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 RNU1-35P-201ENST00000362782 153 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 NDUFA5P4-201ENST00000436704 385 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AL359672.1-201ENST00000442302 409 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC090515.1-201ENST00000465295 476 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AP000763.2-201ENST00000540641 163 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 RPL30P11-203ENST00000598995 310 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC008739.3-201ENST00000603262 127 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC107304.1-201ENST00000604229 296 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AL162713.1-201ENST00000604480 262 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 AC009233.1-201ENST00000616477 371 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 MIR3662-201ENST00000637030 95 ntBASIC2.6□□□□□ -1.99
CMTM3Q96MX0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.6□□□□□ -1.99
CMTM3Q96MX0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RPL9P7-201ENST00000330965 580 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC073325.2-201ENST00000339545 159 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RNU6-655P-201ENST00000362858 107 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 Y_RNA.100-201ENST00000363141 102 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RNA5SP125-201ENST00000364843 120 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RNU1-140P-201ENST00000365040 165 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 MIR134-201ENST00000385258 73 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 MIR450B-201ENST00000401182 78 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 CYCSP48-201ENST00000417124 323 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 USP9YP20-201ENST00000419224 558 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RPS15AP10-201ENST00000432472 382 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RNU7-26P-201ENST00000458980 63 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RNU6-1037P-201ENST00000459571 107 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RPL21P10-201ENST00000463521 490 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC008571.1-201ENST00000467232 300 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC110794.1-201ENST00000505816 425 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 MTND4LP26-201ENST00000518144 282 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC025423.5-201ENST00000550230 219 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC034105.4-201ENST00000568304 277 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AC091135.1-201ENST00000585943 307 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 AP000907.4-201ENST00000604143 237 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 FAM157A-202ENST00000615155 405 ntBASIC2.59□□□□□ -1.99
CMTM3Q96MX0 U6atac.1-201ENST00000616025 117 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms