Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC009238.1-201ENST00000442165 424 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC009237.6-201ENST00000446969 424 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC022364.2-201ENST00000457963 554 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 MTND3P25-201ENST00000509243 135 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC073539.2-201ENST00000597113 165 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC025165.5-201ENST00000602802 578 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC109347.2-201ENST00000610220 349 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 AC026585.1-201ENST00000619582 524 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.24□□□□□ -2.05
ZNF560Q96MR9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
ZNF560Q96MR9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 RNU6-1287P-201ENST00000362914 107 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 Y_RNA.201-201ENST00000364052 96 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 SNORD116-8-201ENST00000384365 95 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 RNU6-1060P-201ENST00000384664 107 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 MIR1-2-201ENST00000384961 85 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 RNU2-3P-201ENST00000410144 191 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC133104.1-201ENST00000429100 218 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC244505.5-201ENST00000443639 207 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 RNU2-53P-201ENST00000516257 147 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC007834.2-201ENST00000536310 343 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC008088.1-201ENST00000580993 280 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AC090897.2-201ENST00000581715 130 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 NDUFA8P1-201ENST00000605525 367 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AL031601.2-202ENST00000622650 282 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF560Q96MR9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
ZNF560Q96MR9 RNU6-529P-201ENST00000363383 104 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 RNU4-48P-201ENST00000365559 182 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 SNORA51.11-201ENST00000384442 131 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 RNU6-45P-201ENST00000384471 107 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ZNF560Q96MR9 SNORD23.1-201ENST00000408212 104 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 RNU6-1140P-201ENST00000410517 106 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 RNU2-23P-201ENST00000410545 195 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 OR9R1P-201ENST00000412200 877 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF560Q96MR9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AL596276.1-201ENST00000434465 418 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AL121890.1-201ENST00000435457 205 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.22□□□□□ -2.05
ZNF560Q96MR9 PSPHP1-201ENST00000450062 261 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 MTND1P27-201ENST00000451117 902 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AC074344.1-201ENST00000512823 224 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 OSBPL9P5-201ENST00000542581 171 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AL590229.1-201ENST00000603497 542 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AC072046.2-201ENST00000618366 268 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 AC078883.4-201ENST00000623218 367 ntBASIC2.22□□□□□ -2.05
ZNF560Q96MR9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
ZNF560Q96MR9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 RNU6-181P-201ENST00000363225 107 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 RNU6-282P-201ENST00000365357 103 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 RNA5SP270-201ENST00000411361 118 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 CYCSP33-201ENST00000414485 327 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AIMP1P2-201ENST00000425294 312 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 HMGB1P31-201ENST00000437242 427 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 KATNBL1P3-201ENST00000443475 909 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC079448.1-201ENST00000449377 373 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 snoU13.14-201ENST00000459372 104 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 MTCO3P9-201ENST00000506989 781 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 RNU7-193P-201ENST00000516723 65 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 MIR514B-201ENST00000516774 80 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 RNU6-445P-201ENST00000516949 107 ntBASIC2.21□□□□□ -2.06
ZNF560Q96MR9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF560Q96MR9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms