Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 RAB9AP3-201ENST00000412737 573 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 MTND2P23-201ENST00000422990 651 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC104332.2-201ENST00000429959 156 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 HMGB1P12-201ENST00000438594 598 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 RAB9AP1-201ENST00000449393 573 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 PCMTD1P1-201ENST00000455560 355 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 FO393415.2-201ENST00000480085 343 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 RN7SL633P-201ENST00000488974 297 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC090096.1-201ENST00000489168 390 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC006445.2-201ENST00000510061 472 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 SMURF2P1-201ENST00000514992 481 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00479Q96M42 SNRPGP18-201ENST00000553000 214 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 MIR4474-201ENST00000579189 78 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 CPDP1-201ENST00000579660 283 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC008739.3-201ENST00000603262 127 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC024220.1-201ENST00000603675 484 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC012468.1-201ENST00000604888 430 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AC116312.1-201ENST00000606841 314 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 AL161629.2-201ENST00000615347 275 ntBASIC2.35□□□□□ -2.03
LINC00479Q96M42 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00479Q96M42 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00479Q96M42 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00479Q96M42 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
LINC00479Q96M42 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LINC00479Q96M42 AL359693.1-201ENST00000614959 2407 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
LINC00479Q96M42 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00479Q96M42 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC00479Q96M42 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC00479Q96M42 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00479Q96M42 MTND5P10-201ENST00000603719 1809 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 RPL9P7-201ENST00000330965 580 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 RNU6-1115P-201ENST00000362490 106 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LINC00479Q96M42 RNU6-1040P-201ENST00000383974 107 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 Y_RNA.463-201ENST00000384271 102 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 RNU6-72P-201ENST00000384285 79 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 RNU6-692P-201ENST00000384496 107 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 MIR606-201ENST00000384851 96 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AL117339.3-201ENST00000418733 162 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 BX276092.3-201ENST00000424182 230 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.34□□□□□ -2.03
LINC00479Q96M42 AL513043.1-201ENST00000439124 535 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AL133547.1-201ENST00000448546 220 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 SNORA84-201ENST00000459229 133 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 RPL9P9-202ENST00000466501 579 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC008571.1-201ENST00000467232 300 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 HMGN2P13-201ENST00000476476 274 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.34□□□□□ -2.03
LINC00479Q96M42 RNU1-61P-201ENST00000516107 151 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 RNU6-699P-201ENST00000517081 110 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.34□□□□□ -2.03
LINC00479Q96M42 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AMZ2P1-203ENST00000565833 850 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC034105.4-201ENST00000568304 277 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC020895.1-201ENST00000595362 272 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC078795.3-201ENST00000602913 472 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC008121.1-201ENST00000603244 268 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 PART1_1.1-201ENST00000611761 217 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 AC011890.2-201ENST00000613393 294 ntBASIC2.34□□□□□ -2.03
LINC00479Q96M42 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
LINC00479Q96M42 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
LINC00479Q96M42 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00479Q96M42 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00479Q96M42 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00479Q96M42 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 RNU6-942P-201ENST00000363002 107 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 SNORA33.2-201ENST00000365413 134 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 RNU6-1035P-201ENST00000384477 107 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 RNU6-738P-201ENST00000384531 106 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 SNORA75.6-201ENST00000391318 127 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 AC113618.1-201ENST00000416747 285 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 MRPS18CP6-201ENST00000423587 223 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 AC018865.2-201ENST00000423631 129 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 AL133396.1-201ENST00000432048 687 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 RPL39P40-201ENST00000445481 146 ntBASIC2.33□□□□□ -2.04
LINC00479Q96M42 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC00479Q96M42 snoU13.28-201ENST00000459235 104 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms