Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM47Q96LD4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM47Q96LD4 AC018555.1-201ENST00000567548 1980 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 RNU6-640P-201ENST00000363693 105 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 RNA5SP130-201ENST00000364431 114 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 MIR329-1-201ENST00000385028 80 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 MIR548A3-201ENST00000385297 97 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 MIR92A2-201ENST00000385299 75 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 MIR3065-201ENST00000390137 79 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 ZNF720P1-201ENST00000562403 1939 ntBASIC5.05□□□□□ -1.6
TRIM47Q96LD4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM47Q96LD4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 AC134026.1-201ENST00000623249 2239 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 ZNF702P-202ENST00000434269 1966 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 Y_RNA.33-201ENST00000362591 102 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 Y_RNA.251-201ENST00000364551 99 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 RNA5SP151-201ENST00000365632 117 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 RNU6-49P-201ENST00000384256 107 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 BTF3L4P2-201ENST00000392798 346 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 RNU6-588P-201ENST00000410281 105 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 AC012671.1-201ENST00000451912 203 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 snoU109.4-201ENST00000458953 143 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 snoU13.24-201ENST00000458998 104 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 DEFB117-201ENST00000602356 141 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 AC099669.2-201ENST00000616549 437 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 AC091905.2-201ENST00000623143 306 ntBASIC5.04□□□□□ -1.6
TRIM47Q96LD4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM47Q96LD4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 SNORA72.2-201ENST00000365028 127 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 Y_RNA.348-201ENST00000365403 103 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 RNU6-573P-201ENST00000383938 106 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 RNU6-281P-201ENST00000384212 103 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 RNU6-1145P-201ENST00000384246 107 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 RNU6-768P-201ENST00000384683 107 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 RNU6-541P-201ENST00000384709 110 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 MIR10B-201ENST00000385011 110 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 RPL21P65-201ENST00000406094 466 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 Y_RNA.630-201ENST00000411370 108 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 GOT2P5-201ENST00000433995 546 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 RPL12P46-201ENST00000436610 195 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 AL353748.1-201ENST00000440753 474 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 BTF3L4P4-201ENST00000506381 449 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 APOOP4-201ENST00000513530 597 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 Y_RNA.757-201ENST00000578934 114 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 AL450472.3-201ENST00000615578 367 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 AC048347.1-201ENST00000624621 427 ntBASIC5.03□□□□□ -1.6
TRIM47Q96LD4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM47Q96LD4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 OR51H2P-202ENST00000641424 3046 ntBASIC5.02□□□□□ -1.61
TRIM47Q96LD4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 ASNSP1-201ENST00000518311 1939 ntBASIC5.02□□□□□ -1.61
TRIM47Q96LD4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM47Q96LD4 RNU1-63P-201ENST00000383902 164 ntBASIC5.02□□□□□ -1.61
TRIM47Q96LD4 MIR449B-201ENST00000384995 97 ntBASIC5.02□□□□□ -1.61
TRIM47Q96LD4 RNU6-763P-201ENST00000390865 106 ntBASIC5.02□□□□□ -1.61
TRIM47Q96LD4 RNU6-1248P-201ENST00000391096 64 ntBASIC5.02□□□□□ -1.61
TRIM47Q96LD4 MTHFD2P2-201ENST00000407725 247 ntBASIC5.02□□□□□ -1.61
TRIM47Q96LD4 AC109327.2-201ENST00000448339 378 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms