Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MIR1252-201ENST00000408861 65 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 EIF4EP2-201ENST00000422816 654 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC098614.2-201ENST00000426040 255 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AL590383.1-201ENST00000428602 75 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 RPL21P2-201ENST00000440049 481 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AL078601.1-201ENST00000444542 271 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC005921.1-201ENST00000510589 286 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 RNU2-27P-201ENST00000516185 142 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 RNU6-703P-201ENST00000516946 107 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC104027.1-201ENST00000521887 300 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC124312.5-201ENST00000604451 268 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC090617.7-201ENST00000623952 126 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 AC058791.1-201ENST00000608412 3198 ntBASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHAMP1Q96JM3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AF117829.1-206ENST00000621883 3802 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC118273.1-201ENST00000525324 3006 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 U3.6-201ENST00000363622 211 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 RNU6-595P-201ENST00000363944 107 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 SNORD14.1-201ENST00000365609 90 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 Y_RNA.424-201ENST00000384063 103 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 MIR325-201ENST00000385260 98 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AL356968.1-201ENST00000416622 474 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC007560.1-201ENST00000426912 237 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 VDAC1P3-201ENST00000434069 851 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 HMGB3P8-201ENST00000449709 577 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC114801.2-201ENST00000503825 781 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 RNU1-143P-201ENST00000516296 146 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 RNU6-794P-201ENST00000517261 64 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC109479.2-201ENST00000517842 174 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AP005902.1-201ENST00000521358 186 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC131281.1-201ENST00000522984 164 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 U1.23-201ENST00000610293 146 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 RNU1-68P-201ENST00000615382 146 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 U1.39-201ENST00000621562 146 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 AC099506.2-201ENST00000623074 221 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 U2.21-201ENST00000637295 81 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 ZNF299P-201ENST00000406845 1804 ntBASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHAMP1Q96JM3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
CHAMP1Q96JM3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.96□□□□□ -1.77
CHAMP1Q96JM3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.96□□□□□ -1.77
CHAMP1Q96JM3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.96□□□□□ -1.77
CHAMP1Q96JM3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.96□□□□□ -1.77
CHAMP1Q96JM3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 RNU6-600P-201ENST00000362524 99 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 SNORA31-201ENST00000362607 130 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 RNA5SP267-201ENST00000364893 126 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 Z98749.2-208ENST00000381646 500 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 RPL21P1-201ENST00000399532 476 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 RPS29P13-201ENST00000402041 169 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC079354.2-201ENST00000453523 154 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 RPL22P13-201ENST00000493291 347 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC093852.1-201ENST00000503587 266 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC104619.4-201ENST00000510773 249 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 Y_RNA.668-201ENST00000516233 93 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 Y_RNA.715-201ENST00000517082 110 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC009812.2-201ENST00000517657 457 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 CASP1P1-201ENST00000526345 212 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 CYCSP39-201ENST00000565821 309 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 MYL12BP1-201ENST00000569826 507 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 MIR3690-201ENST00000580266 75 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AL355598.1-201ENST00000604169 202 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AL137843.1-201ENST00000605078 385 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 AC004852.3-201ENST00000614131 326 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.96□□□□□ -1.78
CHAMP1Q96JM3 HMGB1P24-202ENST00000615653 685 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms