Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AL669831.1-202ENST00000428504 417 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AC092423.1-201ENST00000430165 186 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AC022447.1-201ENST00000515358 464 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RNU6-165P-201ENST00000517170 99 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RAB11AP2-201ENST00000545905 639 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 MIR4441-201ENST00000582623 100 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AL359314.1-201ENST00000616913 261 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 MIR103A1-201ENST00000362165 78 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RNU6-251P-201ENST00000363235 104 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RNA5SP219-201ENST00000390940 113 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RAC1P8-201ENST00000427086 527 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RPL36P19-201ENST00000430744 301 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 RNA5SP112-201ENST00000515937 99 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 AL121652.1-201ENST00000608851 448 ntBASIC-0.02□□□□□ -2.41
SPG11Q96JI7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
SPG11Q96JI7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AL590556.1-201ENST00000423231 483 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AC073261.1-201ENST00000429409 121 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 HSPE1P9-201ENST00000440046 311 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 snoU13.9-201ENST00000458927 103 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AC010631.1-201ENST00000474150 156 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.03□□□□□ -2.41
SPG11Q96JI7 BBIP1P1-201ENST00000602999 279 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AC104465.1-201ENST00000611365 139 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 RNA5SP501-201ENST00000410990 112 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AL359704.1-201ENST00000411586 781 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.03□□□□□ -2.41
SPG11Q96JI7 HMGN2P34-201ENST00000437647 269 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 RAB11AP1-201ENST00000442978 646 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AC132479.1-201ENST00000449160 144 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.03□□□□□ -2.41
SPG11Q96JI7 RNA5SP137-201ENST00000516833 135 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.03□□□□□ -2.41
SPG11Q96JI7 CYB5AP5-201ENST00000549779 389 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AL512310.8-201ENST00000550183 120 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
SPG11Q96JI7 AC007490.1-201ENST00000624321 703 ntBASIC-0.03□□□□□ -2.41
SPG11Q96JI7 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 MIR518A1-201ENST00000385068 85 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 MIR95-201ENST00000385072 81 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 MIR325-201ENST00000385260 98 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 MTND4P20-201ENST00000424125 869 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 CETN4P-201ENST00000432407 469 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AC027119.1-201ENST00000440877 241 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 SNORD19.2-201ENST00000516978 73 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 BNIP3P27-201ENST00000599991 412 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 PART1_2.1-201ENST00000612397 250 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 RNU6-119P-201ENST00000364882 107 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 RNU6-611P-201ENST00000384276 104 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AL139098.1-201ENST00000407291 389 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 PTGES3P4-201ENST00000426243 356 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 YWHAZP8-201ENST00000436935 731 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AC104417.1-201ENST00000523974 751 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AC068790.6-201ENST00000602558 258 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AC008498.1-201ENST00000613012 531 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 MIR6516-201ENST00000630554 81 ntBASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.04□□□□□ -2.42
SPG11Q96JI7 AL049737.1-201ENST00000413920 1403 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
SPG11Q96JI7 SNORA29-201ENST00000384183 140 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 MIR587-201ENST00000384845 96 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 MIR218-1-201ENST00000384999 110 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 AL449283.1-202ENST00000418249 604 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 BTF3P11-201ENST00000426582 477 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 AC092001.1-201ENST00000453012 261 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.05□□□□□ -2.42
SPG11Q96JI7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.05□□□□□ -2.42
SPG11Q96JI7 AC233702.2-202ENST00000562547 291 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms