Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL590632.1-201ENST00000424289 371 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 RPL21P40-201ENST00000428586 483 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 RPS15AP5-201ENST00000436276 388 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC125238.1-201ENST00000448842 249 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 RNU1-54P-201ENST00000517181 120 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC093027.1-201ENST00000546698 429 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC021739.1-201ENST00000559631 174 ntBASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM43Q96BQ3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 SAR1AP2-201ENST00000392696 594 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 RNA5SP508-201ENST00000411327 119 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 RPS15AP10-201ENST00000432472 382 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 AL645568.3-201ENST00000433683 316 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 NIPA2P5-201ENST00000452282 464 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 AC117440.1-201ENST00000474107 571 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 RNU6-377P-201ENST00000515965 102 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 AC020895.1-201ENST00000595362 272 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 AC064836.2-201ENST00000609491 462 ntBASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM43Q96BQ3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 CDC27P3-201ENST00000635418 1910 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 SNORD62.1-201ENST00000362541 86 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 RNU6-78P-201ENST00000362897 107 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 RNU6-827P-201ENST00000365553 106 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 Y_RNA.509-201ENST00000384506 99 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC063976.3-201ENST00000426849 329 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 FABP5P14-201ENST00000437273 393 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC092001.1-201ENST00000453012 261 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC083906.5-201ENST00000503722 328 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 RNU6-559P-201ENST00000516151 98 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC022634.1-201ENST00000520765 532 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC006199.1-201ENST00000548728 219 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AL121821.2-201ENST00000556081 394 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 POLR3GP2-201ENST00000588366 668 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC016727.1-205ENST00000605437 569 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AL121917.1-203ENST00000605534 577 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC011890.2-201ENST00000613393 294 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 MIR6128-201ENST00000615528 109 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 AC244205.2-202ENST00000635781 342 ntBASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM43Q96BQ3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 SNORA14A-201ENST00000364773 135 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 RNU1-100P-201ENST00000365255 165 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 RNU6-1297P-201ENST00000384415 104 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC245291.1-201ENST00000419501 328 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC236972.2-201ENST00000434979 310 ntBASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM43Q96BQ3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 290.1 ms