Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR598-201ENST00000384868 97 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 RNU6-193P-201ENST00000410977 107 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 OR6C66P-201ENST00000414917 930 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AC098614.2-201ENST00000426040 255 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 RPL31P35-201ENST00000431058 377 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AL122001.1-201ENST00000457027 370 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 MTND4LP3-201ENST00000468320 276 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AC116337.2-201ENST00000477662 156 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AL160314.1-201ENST00000490836 438 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 SUMO2P6-201ENST00000505273 288 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 RNU6-1315P-201ENST00000517187 99 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 MIR4528-201ENST00000577763 90 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AC136443.5-201ENST00000603741 370 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AL645939.4-201ENST00000604495 135 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AP000860.1-201ENST00000605250 559 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 MIR15A-201ENST00000607334 83 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AL365204.3-201ENST00000612448 685 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 MIR3199-2-201ENST00000636243 86 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AP003399.1-201ENST00000637534 361 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.194-201ENST00000363985 102 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNY4P16-201ENST00000364768 94 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 NDUFS5P1-201ENST00000405668 289 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 U3.40-201ENST00000408706 208 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC007560.1-201ENST00000426912 237 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 USP9YP12-201ENST00000450481 570 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RPS29P15-201ENST00000458329 171 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC079382.1-201ENST00000493346 557 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC025755.1-201ENST00000521306 278 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC022616.3-201ENST00000523940 148 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 ADI1P3-201ENST00000549509 470 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC024619.4-201ENST00000580924 316 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC008739.2-201ENST00000597006 317 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC090578.1-201ENST00000604955 591 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 PVT1_3.1-201ENST00000620853 95 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC138649.3-201ENST00000622154 254 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.41-201ENST00000362646 102 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU4-21P-201ENST00000362802 126 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 SNORD56.2-201ENST00000363242 71 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU1-42P-201ENST00000364033 160 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU6-898P-201ENST00000365627 104 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.381-201ENST00000365666 102 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU6-39P-201ENST00000384344 107 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU2-9P-201ENST00000410194 145 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 CDK8P2-201ENST00000415020 547 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 PIGFP2-201ENST00000421400 651 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC104651.1-201ENST00000427559 735 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC093106.2-201ENST00000428212 385 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AL022238.1-201ENST00000442557 355 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU6-1220P-201ENST00000517126 108 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 Z84480.1-201ENST00000605131 311 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC087752.4-201ENST00000605911 462 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC073308.1-201ENST00000623696 305 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 AC068880.5-201ENST00000624331 290 ntBASIC1.56□□□□□ -2.16
SHROOM3Q8TF72 RNU6-1167P-201ENST00000363227 94 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 RNU6-61P-201ENST00000365528 109 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 RNU6-456P-201ENST00000384493 107 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.553-201ENST00000384670 102 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC068050.1-201ENST00000394891 380 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AL139397.2-201ENST00000404529 772 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC073464.1-201ENST00000429823 534 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC010153.1-201ENST00000432862 727 ntBASIC1.55□□□□□ -2.16
SHROOM3Q8TF72 AC104850.1-201ENST00000435940 476 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms