Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 AL138889.2-201ENST00000603883 242 ntBASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 AL670379.2-201ENST00000604983 252 ntBASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 AL670379.4-201ENST00000605279 254 ntBASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 BNIP3P10-201ENST00000605360 577 ntBASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 AC012360.2-201ENST00000609349 391 ntBASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 AL355816.2-201ENST00000610049 647 ntBASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 AP002371.2-201ENST00000624450 503 ntBASIC1.41□□□□□ -2.18
CLHC1Q8NHS4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.4□□□□□ -2.18
CLHC1Q8NHS4 RNU6-655P-201ENST00000362858 107 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 RNU6-636P-201ENST00000384598 107 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 SNORA48.1-201ENST00000390879 135 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 RPS20P2-201ENST00000402520 389 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 RNU2-23P-201ENST00000410545 195 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 UBE2V1P10-201ENST00000414685 269 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 RPL22P18-201ENST00000417197 377 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 AC084290.1-201ENST00000434995 374 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 PTENP1-201ENST00000447117 1215 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 Y_RNA.638-201ENST00000459374 113 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 MIR3683-201ENST00000580847 82 ntBASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
CLHC1Q8NHS4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 RNU6-1210P-201ENST00000363775 107 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 RNU6-157P-201ENST00000383957 107 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 RNA5SP390-201ENST00000410191 113 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 MTCO2P21-201ENST00000419780 677 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 MTND1P12-201ENST00000455231 147 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 Y_RNA.689-201ENST00000516589 107 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC107934.1-201ENST00000522215 217 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 MTCYBP33-201ENST00000575007 1130 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC012065.4-201ENST00000602445 679 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 WISP1-OT1-201ENST00000602893 642 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 RNU4-5P-201ENST00000607255 135 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC021755.4-201ENST00000616620 456 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC024940.5-201ENST00000622889 474 ntBASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.39□□□□□ -2.19
CLHC1Q8NHS4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 Y_RNA.40-201ENST00000362645 93 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 RNU4-13P-201ENST00000364019 141 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 SNORD14B-201ENST00000364533 90 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 MIR122-201ENST00000385044 85 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 MIR517C-201ENST00000385103 95 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 SNORA67.6-201ENST00000391093 99 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 RNA5SP100-201ENST00000410903 110 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 RNA5SP59-201ENST00000410922 110 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC074117.2-201ENST00000417130 397 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC006366.1-201ENST00000422002 759 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC092648.1-201ENST00000425870 423 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 snoU13.9-201ENST00000458927 103 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC005908.1-201ENST00000468701 347 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 FO393415.2-201ENST00000480085 343 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC132942.1-201ENST00000486753 483 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC011979.2-201ENST00000527568 352 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 Z82243.1-201ENST00000609432 473 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.38□□□□□ -2.19
CLHC1Q8NHS4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 RNU1-17P-201ENST00000363022 152 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 NCOR1P3-201ENST00000420479 303 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.37□□□□□ -2.19
CLHC1Q8NHS4 MTCO3P46-201ENST00000425787 232 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms