Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
RETREG2Q8NC44 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RETREG2Q8NC44 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RETREG2Q8NC44 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RETREG2Q8NC44 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RETREG2Q8NC44 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RETREG2Q8NC44 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RETREG2Q8NC44 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RETREG2Q8NC44 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RETREG2Q8NC44 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RETREG2Q8NC44 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RETREG2Q8NC44 RNU6-1159P-201ENST00000362933 107 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 RNY3P11-201ENST00000364153 102 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 SNORA51.11-201ENST00000384442 131 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 Y_RNA.551-201ENST00000384661 102 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 MIR1183-201ENST00000408856 89 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 RNU7-87P-201ENST00000459343 62 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 RPL30P12-201ENST00000474666 353 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AF213884.1-201ENST00000488102 463 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 RPL30P1-201ENST00000488676 339 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 RNU6-1198P-201ENST00000516904 67 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AC109329.1-201ENST00000518744 317 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 MIR3944-201ENST00000581277 108 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 MIR3136-201ENST00000583498 78 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AL359198.2-201ENST00000611836 194 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 CR392039.5-201ENST00000623201 510 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AP001486.2-201ENST00000561652 5113 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 AC016588.2-201ENST00000632484 3021 ntBASIC4.65□□□□□ -1.67
RETREG2Q8NC44 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RETREG2Q8NC44 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RETREG2Q8NC44 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RETREG2Q8NC44 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RETREG2Q8NC44 RNU6-1010P-201ENST00000362757 107 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 RNU5B-2P-201ENST00000363036 113 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 SNORD114-19-201ENST00000363072 75 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 RNU6-1285P-201ENST00000363480 105 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 RNU6-1318P-201ENST00000365389 103 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 EI24P2-201ENST00000397776 1076 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RETREG2Q8NC44 OSTCP8-201ENST00000445117 448 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 AC110794.1-201ENST00000505816 425 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 AC090617.3-201ENST00000573670 475 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 AL138963.2-201ENST00000605137 226 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.64□□□□□ -1.67
RETREG2Q8NC44 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RETREG2Q8NC44 Z82217.1-201ENST00000625157 8149 ntBASIC4.64□□□□□ -1.67
RETREG2Q8NC44 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 Y_RNA.27-201ENST00000362540 103 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 RNU1-76P-201ENST00000362903 159 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 Y_RNA.106-201ENST00000363189 100 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 RNU6-137P-201ENST00000363680 108 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 RNU6-505P-201ENST00000384427 107 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 Y_RNA.574-201ENST00000384766 95 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 MIR32-201ENST00000384965 70 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 SNORA11.1-201ENST00000408133 129 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AL356968.1-201ENST00000416622 474 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AC073910.1-201ENST00000445047 438 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 TOMM22P6-201ENST00000465035 409 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AF186996.7-201ENST00000492781 209 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AC025554.1-201ENST00000505641 188 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AC074250.1-201ENST00000511117 192 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 RN7SKP272-201ENST00000516988 232 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AC131281.1-201ENST00000522984 164 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AC010928.2-201ENST00000588017 287 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 AC012603.1-201ENST00000606424 528 ntBASIC4.63□□□□□ -1.67
RETREG2Q8NC44 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RETREG2Q8NC44 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RETREG2Q8NC44 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
RETREG2Q8NC44 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RETREG2Q8NC44 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.62□□□□□ -1.67
RETREG2Q8NC44 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RETREG2Q8NC44 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RETREG2Q8NC44 RNU6-874P-201ENST00000362390 105 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 Y_RNA.276-201ENST00000364732 109 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 Y_RNA.358-201ENST00000365491 99 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 SNORA70.4-201ENST00000365509 134 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 Y_RNA.556-201ENST00000384677 113 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 CBX3P6-201ENST00000430257 527 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 USP9YP16-201ENST00000430287 407 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 GOT2P5-201ENST00000433995 546 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 Z82188.1-201ENST00000436709 154 ntBASIC4.62□□□□□ -1.67
RETREG2Q8NC44 USP9YP23-201ENST00000455085 407 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms