Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL513124.1-201ENST00000450410 614 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 AL109933.2-201ENST00000452651 260 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE4Q8N205 HMGN1P18-201ENST00000457642 277 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 HSPE1P6-201ENST00000479457 291 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE4Q8N205 AC107222.1-201ENST00000510899 637 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 SCGB1D5P-201ENST00000515134 247 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 Y_RNA.668-201ENST00000516233 93 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 RNU6-264P-201ENST00000517134 104 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 Y_RNA.721-201ENST00000517207 102 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNE4Q8N205 AC110741.2-201ENST00000605278 268 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE4Q8N205 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNE4Q8N205 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.73□□□□□ -1.81
SYNE4Q8N205 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
SYNE4Q8N205 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.73□□□□□ -1.81
SYNE4Q8N205 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE4Q8N205 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE4Q8N205 ZNF72P-201ENST00000425869 1908 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 Y_RNA.2-201ENST00000362330 96 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 Y_RNA.106-201ENST00000363189 100 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 Y_RNA.389-201ENST00000383924 113 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 RNU6-1181P-201ENST00000384191 106 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 RNU6-45P-201ENST00000384471 107 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 RNU6-823P-201ENST00000391042 103 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 PCNPP5-201ENST00000452246 481 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AL353752.1-201ENST00000454946 260 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AL583843.1-201ENST00000456070 346 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AL136097.1-201ENST00000456945 913 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 snoU13.4-201ENST00000458916 104 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC026801.1-201ENST00000497178 464 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC083906.5-201ENST00000503722 328 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC105758.1-201ENST00000506038 399 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 MRPS35P2-201ENST00000508242 191 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC096745.1-201ENST00000509945 370 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 SNORA70.14-201ENST00000516205 110 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 RNU6-388P-201ENST00000517012 105 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 RNU6-389P-201ENST00000517048 105 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 RNU6-1073P-201ENST00000517182 106 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 IGKV2D-23-201ENST00000518179 286 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC104027.1-201ENST00000521887 300 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC104576.1-201ENST00000524225 88 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE4Q8N205 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 MIR5047-201ENST00000579212 100 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.72□□□□□ -1.81
SYNE4Q8N205 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SYNE4Q8N205 AP003122.5-201ENST00000527668 3766 ntBASIC3.72□□□□□ -1.81
SYNE4Q8N205 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SYNE4Q8N205 AL137003.2-201ENST00000606924 2538 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 RNU6-371P-201ENST00000364283 108 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 MIR578-201ENST00000384828 96 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 RNU6-1109P-201ENST00000391187 107 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 RNA5SP31-201ENST00000411144 127 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 Z98949.2-201ENST00000440996 144 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 AL360271.2-201ENST00000447710 161 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 EEF1B2P7-201ENST00000451177 676 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 CECR9-201ENST00000453421 199 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 RPL23AP31-201ENST00000456160 467 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 AC015911.1-201ENST00000495111 156 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 MTND4LP22-201ENST00000508209 276 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 AC116655.1-201ENST00000508324 901 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 MTND3P25-201ENST00000509243 135 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 RN7SKP258-201ENST00000517151 304 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 SNORD116.3-201ENST00000517176 78 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 MYL12BP1-201ENST00000569826 507 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 PRR13P7-201ENST00000605538 430 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 MIR15A-201ENST00000607334 83 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 AL355810.1-201ENST00000614629 552 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 MIR7843-201ENST00000622274 79 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 AC138627.2-201ENST00000624202 601 ntBASIC3.71□□□□□ -1.82
SYNE4Q8N205 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.71□□□□□ -1.82
SYNE4Q8N205 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SYNE4Q8N205 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms