Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LINC00528Q8N1L1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC3.81□□□□□ -1.8
LINC00528Q8N1L1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
LINC00528Q8N1L1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LINC00528Q8N1L1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 MIR375-201ENST00000362103 64 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 RNU6-1279P-201ENST00000383917 103 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 RNU6-418P-201ENST00000384035 107 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 SNRPCP3-201ENST00000474888 476 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 AC006539.1-201ENST00000481419 501 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 COX6B1P5-201ENST00000509843 249 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 PARP4P3-201ENST00000510265 317 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 RN7SKP21-201ENST00000516503 220 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 RNU6-1096P-201ENST00000517089 102 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 MIR4489-201ENST00000578869 62 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 MIR6809-201ENST00000612189 116 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 AC011944.2-201ENST00000624440 683 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 AL162726.3-218ENST00000636401 95 ntBASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LINC00528Q8N1L1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 RNU4-36P-201ENST00000364294 144 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 Y_RNA.244-201ENST00000364484 109 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 Y_RNA.290-201ENST00000364879 114 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 Y_RNA.298-201ENST00000364960 107 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 RNU6-198P-201ENST00000384258 104 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 DBIP2-201ENST00000419076 262 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 AC099670.2-201ENST00000435130 321 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 SNRPGP13-201ENST00000442212 177 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 RPL39P25-201ENST00000449384 154 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 RN7SL515P-201ENST00000463999 297 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 PPBPP1-201ENST00000510807 373 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 SCARNA23-201ENST00000516060 130 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 RN7SKP288-201ENST00000516227 268 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 IGKV2-18-201ENST00000522607 343 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 AC010547.6-201ENST00000571789 193 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 RN7SL703P-201ENST00000578485 302 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 MIR1273E-201ENST00000581165 102 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 AC021443.1-201ENST00000604478 211 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 uc_338.14-201ENST00000613162 166 ntBASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
LINC00528Q8N1L1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LINC00528Q8N1L1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms