Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU6-7-201ENST00000364784 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-8-201ENST00000365467 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-25P-201ENST00000383873 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-1-201ENST00000383898 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-48P-201ENST00000384161 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-36P-201ENST00000384172 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-4P-201ENST00000384205 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-5P-201ENST00000384238 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-3P-201ENST00000384314 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-16P-201ENST00000384385 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-15P-201ENST00000384534 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-2-201ENST00000384627 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-29P-201ENST00000384637 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-9-201ENST00000384776 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 MIR628-201ENST00000385229 95 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 MTCYBP2-201ENST00000407745 171 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU2-33P-201ENST00000410344 192 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNA5SP494-201ENST00000410653 129 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 EI24P1-201ENST00000416584 867 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 SDAD1P3-201ENST00000427380 333 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AL357552.1-201ENST00000445254 415 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC013470.1-201ENST00000453438 462 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC079354.2-201ENST00000453523 154 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC091153.1-201ENST00000466297 402 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RPL23AP14-201ENST00000468281 468 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RPL7P5-201ENST00000471472 736 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 RPL21P13-201ENST00000488305 481 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 AL137100.2-201ENST00000555786 315 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC010900.2-201ENST00000604508 210 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 RNU6-6P-201ENST00000606623 107 ntBASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VRK3Q8IV63 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VRK3Q8IV63 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VRK3Q8IV63 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VRK3Q8IV63 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
VRK3Q8IV63 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VRK3Q8IV63 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VRK3Q8IV63 Z75746.1-201ENST00000440243 2080 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AL157777.2-201ENST00000258070 137 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 MIR412-201ENST00000362142 91 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 snoU2_19.2-201ENST00000363024 80 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 RNU6-1074P-201ENST00000383995 104 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 RNU6-356P-201ENST00000384140 107 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 MIR23B-201ENST00000384832 97 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK3Q8IV63 RNU6-1025P-201ENST00000410629 104 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 RNU2-71P-201ENST00000411395 189 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK3Q8IV63 FABP5P15-201ENST00000453566 214 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 RPL23AP45-201ENST00000476406 468 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK3Q8IV63 IGKV2-26-201ENST00000518305 343 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC130289.1-201ENST00000577321 73 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK3Q8IV63 MIR4429-201ENST00000580105 73 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC006557.5-201ENST00000603126 811 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC009314.1-201ENST00000603871 304 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.37□□□□□ -1.87
VRK3Q8IV63 AC091903.1-201ENST00000624322 454 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 U2.22-201ENST00000636441 106 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VRK3Q8IV63 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VRK3Q8IV63 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
VRK3Q8IV63 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
VRK3Q8IV63 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
VRK3Q8IV63 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 AL513302.2-201ENST00000562313 1842 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
VRK3Q8IV63 Y_RNA.29-201ENST00000362570 113 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 Y_RNA.237-201ENST00000364439 102 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 Y_RNA.352-201ENST00000365439 102 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 RNU6-827P-201ENST00000365553 106 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
VRK3Q8IV63 MIR521-1-201ENST00000384902 87 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AL139156.1-201ENST00000412785 841 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 RPS12P23-201ENST00000419579 400 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AC096920.1-201ENST00000423991 241 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.36□□□□□ -1.87
VRK3Q8IV63 U8.21-201ENST00000459536 136 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms