Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC138623.1-201ENST00000418060 216 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 AL358075.3-201ENST00000426289 226 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 POLR2KP2-201ENST00000438155 177 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 MRPS10P1-201ENST00000448483 130 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 RPS29P19-201ENST00000479709 171 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 AP001025.1-201ENST00000486139 332 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 RPL7P47-201ENST00000497299 556 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 AC023141.12-201ENST00000512399 199 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 RPL21P9-201ENST00000556149 474 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 AC022655.2-201ENST00000577280 318 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 MIR3690-201ENST00000580266 75 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 KLKP1-201ENST00000595979 403 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 AC004825.2-201ENST00000616634 455 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
TRIM50Q86XT4 ADAM3A-203ENST00000461344 2157 ntBASIC4.71□□□□□ -1.66
TRIM50Q86XT4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 NOL8P1-201ENST00000508336 3529 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 SNORA31-201ENST00000362607 130 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 RNU6-1035P-201ENST00000384477 107 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC244670.1-201ENST00000436879 112 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC010095.1-201ENST00000443543 144 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 RPL30P12-201ENST00000474666 353 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 VWA8P1-201ENST00000510889 176 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 RNU6-1278P-201ENST00000516130 107 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC005176.2-201ENST00000596933 147 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC072026.1-201ENST00000605023 201 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 MIR6875-201ENST00000617506 72 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 AC140113.4-201ENST00000622087 222 ntBASIC4.7□□□□□ -1.66
TRIM50Q86XT4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM50Q86XT4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 RNU6-873P-201ENST00000363833 107 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 Y_RNA.230-201ENST00000364348 109 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 RNU6-1289P-201ENST00000384431 106 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 RNU6-1140P-201ENST00000410517 106 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 RN7SKP177-201ENST00000410567 355 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 MTCO1P5-201ENST00000433573 344 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 Y_RNA.638-201ENST00000459374 113 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 AP004242.1-201ENST00000533701 349 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 NACAP3-201ENST00000552100 481 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 AC021231.3-201ENST00000558497 370 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 AC034105.4-201ENST00000568304 277 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 RN7SL703P-201ENST00000578485 302 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 AL357075.2-201ENST00000614906 189 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 MIR7151-201ENST00000617477 60 ntBASIC4.69□□□□□ -1.66
TRIM50Q86XT4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM50Q86XT4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AC092268.1-201ENST00000342691 405 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 SNORD115-8-201ENST00000363856 82 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 SNORD115-38-201ENST00000365037 82 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 Y_RNA.383-201ENST00000383855 97 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AL160275.2-201ENST00000412010 394 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AC099548.1-201ENST00000421443 426 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AC078809.1-201ENST00000427601 140 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 RPL39P29-201ENST00000447779 157 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 HMGN2P10-201ENST00000448085 265 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AP000705.1-201ENST00000454567 350 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 RNA5SP246-201ENST00000458909 119 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 RN7SL604P-201ENST00000492589 296 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AC011921.3-201ENST00000605540 361 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 MIR3529-201ENST00000637713 78 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM50Q86XT4 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
TRIM50Q86XT4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms