Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPL36AP53-201ENST00000432891 316 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 PSMC1P5-201ENST00000512850 177 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC018659.1-201ENST00000551083 169 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC073544.2-201ENST00000601155 540 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 RN7SKP142-201ENST00000411236 328 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 uc_338.15-201ENST00000615470 191 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC092608.3-201ENST00000625017 386 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AL138713.1-201ENST00000624026 2130 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 MTND4P16-201ENST00000466108 1367 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 SNORA4.1-201ENST00000364263 144 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 Y_RNA.245-201ENST00000364493 95 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 RNU6-39P-201ENST00000384344 107 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 RNU6-322P-201ENST00000516010 103 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 RNU6-1183P-201ENST00000517054 60 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AP001893.2-201ENST00000526949 202 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC007834.2-201ENST00000536310 343 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC004853.1-201ENST00000604902 698 ntBASIC0.22□□□□□ -2.37
CSMD3Q7Z407 AC023934.1-201ENST00000574529 2389 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 ENSAP3-201ENST00000312710 333 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AL356776.1-201ENST00000406574 447 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 RNU2-64P-201ENST00000411315 191 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC012213.3-201ENST00000577199 777 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC091152.3-201ENST00000604227 325 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 MIR214-201ENST00000385214 110 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 MTND5P14-201ENST00000441481 1267 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 OR6C5P-201ENST00000452388 923 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC010409.1-201ENST00000487382 476 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC084024.2-201ENST00000503480 791 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 CYCSP27-201ENST00000527643 293 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC090079.2-201ENST00000575289 768 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 SNORD39.3-201ENST00000584451 71 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AL020997.3-201ENST00000602843 359 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC108676.2-201ENST00000605225 163 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC004492.1-201ENST00000607036 742 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AL138726.1-201ENST00000614873 333 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC106800.4-201ENST00000614905 153 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 RNU6-673P-201ENST00000365084 104 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 RPS15AP9-201ENST00000439856 381 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AL133373.1-201ENST00000497098 94 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 Y_RNA.654-201ENST00000497848 106 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 SNORA31.4-201ENST00000516049 129 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 RN7SKP256-201ENST00000517201 314 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AP003066.2-201ENST00000529375 555 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC095057.3-201ENST00000567102 1157 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 AC084824.5-201ENST00000612009 413 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.21□□□□□ -2.38
CSMD3Q7Z407 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.21□□□□□ -2.38
CSMD3Q7Z407 MIR424-201ENST00000362227 98 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 GPM6BP2-201ENST00000432046 144 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 GPM6BP1-201ENST00000446387 144 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC116655.1-201ENST00000508324 901 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 SNORA14.1-201ENST00000516113 141 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AL158211.4-201ENST00000606988 584 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 U8.7-201ENST00000364940 136 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 PIGFP2-201ENST00000421400 651 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC090142.3-201ENST00000519012 385 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 HMGB1P33-201ENST00000563485 527 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC093249.1-201ENST00000567049 203 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC073410.2-201ENST00000603240 332 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 RNU6-1339P-201ENST00000363574 91 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 Y_RNA.453-201ENST00000384223 109 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 MIR29B2-201ENST00000385055 81 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 PIGPP2-201ENST00000411569 458 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC132479.1-201ENST00000449160 144 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AL049874.1-201ENST00000489560 388 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.2□□□□□ -2.38
CSMD3Q7Z407 RN7SKP88-201ENST00000516847 250 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 RNU6-902P-201ENST00000517212 91 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 RAB11AP2-201ENST00000545905 639 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 MIR4782-201ENST00000577987 79 ntBASIC0.2□□□□□ -2.38
CSMD3Q7Z407 AL022345.2-201ENST00000606307 135 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms