Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 SNORA63.4-201ENST00000362763 126 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-1325P-201ENST00000364905 105 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-744P-201ENST00000365557 107 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-1316P-201ENST00000384242 108 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-611P-201ENST00000384276 104 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-1151P-201ENST00000384684 107 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-95P-201ENST00000384697 107 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-417P-201ENST00000384712 107 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 MIR558-201ENST00000384920 94 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 MIR1250-201ENST00000408098 113 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RPS26P56-201ENST00000444468 240 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AC002381.1-201ENST00000447049 280 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNU7-182P-201ENST00000459009 62 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RPL27AP5-201ENST00000469428 449 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AC117440.1-201ENST00000474107 571 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AC005921.1-201ENST00000510589 286 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 RNA5SP341-201ENST00000516261 117 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 MRPS18CP4-201ENST00000535821 231 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 MIR4679-2-201ENST00000578358 77 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 MIR5692C1-201ENST00000585309 91 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AC005000.2-201ENST00000605468 310 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AC034102.8-201ENST00000615146 484 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.2□□□□□ -1.9
BHLHA9Q7RTU4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-1130P-201ENST00000365434 107 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 Y_RNA.568-201ENST00000384742 113 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AL138885.1-201ENST00000405921 675 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 SNRPFP3-201ENST00000457792 225 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC016925.1-201ENST00000458303 298 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC091179.1-201ENST00000461606 579 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC087477.1-201ENST00000465747 340 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 RPL9P9-202ENST00000466501 579 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC140059.1-201ENST00000489238 361 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 SNORA31.6-201ENST00000516241 130 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 LARP7P2-201ENST00000575306 125 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AL138889.2-201ENST00000603883 242 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 AL591516.1-201ENST00000611326 274 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 U73479.1-201ENST00000618062 168 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 U6.106-201ENST00000636360 105 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 BX322639.1-202ENST00000423987 2213 ntBASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.19□□□□□ -1.9
BHLHA9Q7RTU4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AL391516.1-201ENST00000554380 2449 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-853P-201ENST00000364306 107 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 U3.11-201ENST00000364476 212 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 RNA5SP189-201ENST00000364920 115 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-708P-201ENST00000384217 107 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 SNORA51.11-201ENST00000384442 131 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 EIF5P1-201ENST00000400019 1231 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AC010881.1-201ENST00000433830 235 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 RNU7-170P-201ENST00000459303 61 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 RPS15AP17-201ENST00000470598 390 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AC055855.1-201ENST00000489563 579 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 RNU6-1338P-201ENST00000516328 91 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 RNU1-54P-201ENST00000517181 120 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AC144568.1-201ENST00000520139 137 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 HIGD1AP6-201ENST00000521833 279 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AC093023.1-201ENST00000547375 507 ntBASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.18□□□□□ -1.9
BHLHA9Q7RTU4 AC233702.2-202ENST00000562547 291 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms