Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 ANP32BP2-201ENST00000454525 545 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 AL121594.1-201ENST00000475906 575 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 AC025554.1-201ENST00000505641 188 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 SCARNA8-201ENST00000515924 131 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 SNORA43.2-201ENST00000516652 128 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 RNU2-56P-201ENST00000516826 190 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 MIR5582-201ENST00000579697 68 ntBASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXR1Q6PIV2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 RN7SKP224-201ENST00000364140 325 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 SNORD32A-201ENST00000364805 84 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 RNU1-44P-201ENST00000384453 163 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 CKS1BP5-201ENST00000434172 273 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 RNU6-625P-201ENST00000459412 107 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 RN7SKP122-201ENST00000515923 296 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 RNA5SP290-201ENST00000517133 127 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AC115990.1-201ENST00000526957 301 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AC107016.1-201ENST00000550463 337 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AL360157.1-201ENST00000565962 87 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 MTND5P34-201ENST00000568888 325 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 RN7SL690P-201ENST00000582087 240 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AC091178.1-203ENST00000584586 279 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 AC023043.3-201ENST00000593113 385 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 MAPK10-320ENST00000641462 6696 ntBASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.6□□□□□ -1.67
FOXR1Q6PIV2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 RNU6-873P-201ENST00000363833 107 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 Y_RNA.309-201ENST00000365046 111 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 SNORD37.2-201ENST00000391075 66 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 Y_RNA.595-201ENST00000410403 105 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AC006461.1-201ENST00000412637 326 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AC007919.1-201ENST00000429380 217 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 ZNF702P-202ENST00000434269 1966 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AL357134.1-201ENST00000445848 426 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 snoU13.6-201ENST00000458785 104 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AC091868.1-201ENST00000508746 304 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 RNU6-1256P-201ENST00000516539 103 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AC018448.1-201ENST00000552843 316 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AL121603.1-201ENST00000553815 142 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AL356489.2-201ENST00000566968 3528 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AL356218.2-201ENST00000605264 187 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 AC068724.3-201ENST00000625906 87 ntBASIC4.59□□□□□ -1.67
FOXR1Q6PIV2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.68
FOXR1Q6PIV2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
FOXR1Q6PIV2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 SNORD113.2-201ENST00000364166 89 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 Y_RNA.329-201ENST00000365209 107 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 SNORA70F-201ENST00000384142 135 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 SNORA70E-201ENST00000384492 135 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 MIR549A-201ENST00000385268 96 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 RN7SKP27-201ENST00000410684 333 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 RPEP3-201ENST00000425462 676 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AL732292.1-201ENST00000426692 226 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AL135790.2-201ENST00000437701 267 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AC124916.1-201ENST00000444020 547 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AC109327.1-201ENST00000471666 403 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 RNU5E-3P-201ENST00000515913 68 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 RN7SKP164-201ENST00000516138 266 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AC109810.1-201ENST00000534066 224 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 MIR4716-201ENST00000579628 84 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 LARP7P3-201ENST00000579888 337 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 AC020914.4-201ENST00000597690 277 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 CR381572.2-201ENST00000624852 397 ntBASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.58□□□□□ -1.68
FOXR1Q6PIV2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms