Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 Y_RNA.142-201ENST00000363491 102 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 MIR218-1-201ENST00000384999 110 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AL591043.1-201ENST00000432461 424 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 RPS29P27-201ENST00000463711 170 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 RN7SL283P-201ENST00000489055 303 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 PTP4A1P4-201ENST00000512479 322 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC091826.1-201ENST00000514065 313 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC007991.1-201ENST00000522680 631 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 MIR4790-201ENST00000577799 79 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC105245.1-201ENST00000581934 244 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC008739.3-201ENST00000603262 127 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC069294.1-201ENST00000608397 350 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 MIR6075-201ENST00000620782 95 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.29□□□□□ -1.88
PPP4R4Q6NUP7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-527P-201ENST00000363425 104 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 Y_RNA.151-201ENST00000363566 112 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-1317P-201ENST00000364582 104 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNA5SP51-201ENST00000364750 119 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RN7SKP158-201ENST00000410453 326 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNU4-14P-201ENST00000410858 122 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-293P-201ENST00000411259 106 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RPL21P23-201ENST00000446654 460 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-1037P-201ENST00000459571 107 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 MTCO1P29-201ENST00000496868 288 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RNU6-277P-201ENST00000516272 106 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AC010186.2-204ENST00000537668 439 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 MIR4444-1-201ENST00000581696 74 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 MIR4444-2-201ENST00000584390 74 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 POLR3GP2-201ENST00000588366 668 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 Y_RNA.804-201ENST00000615262 101 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 AC012442.3-202ENST00000636742 206 ntBASIC3.28□□□□□ -1.88
PPP4R4Q6NUP7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
PPP4R4Q6NUP7 AC000403.1-201ENST00000613696 3585 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 OR56A5-201ENST00000340110 738 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 Y_RNA.263-201ENST00000364659 114 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 MIR218-2-201ENST00000385006 110 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 RNU6-1009P-201ENST00000390996 107 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 RNA5SP171-201ENST00000391071 115 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 EIF4EP4-201ENST00000424916 578 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 RPS15AP10-201ENST00000432472 382 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 RPS3AP52-201ENST00000435639 297 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 SNRPEP8-201ENST00000442866 260 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 AC097462.2-201ENST00000504623 481 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 SMURF2P1-201ENST00000514992 481 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 SNORA25.11-201ENST00000515935 105 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 AL133215.3-201ENST00000609801 448 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 AL132765.2-201ENST00000610812 351 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 AL161423.1-201ENST00000613700 262 ntBASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.27□□□□□ -1.89
PPP4R4Q6NUP7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RNU1-140P-201ENST00000365040 165 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RPL21P75-201ENST00000396599 483 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RPL21P28-201ENST00000401418 483 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RNU2-23P-201ENST00000410545 195 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 RNU2-41P-201ENST00000410991 178 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC138623.1-201ENST00000418060 216 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AC006946.1-201ENST00000429106 328 ntBASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.26□□□□□ -1.89
PPP4R4Q6NUP7 AL031659.1-201ENST00000447075 539 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms