Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AP005660.1-201ENST00000522972 293 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 AC039056.2-201ENST00000622261 511 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 AL079305.1-201ENST00000623159 3008 ntBASIC4.31□□□□□ -1.72
RNF43Q68DV7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF43Q68DV7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF43Q68DV7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF43Q68DV7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 RNA5SP361-201ENST00000362686 118 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 RNU6-17P-201ENST00000384245 107 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 RNU6-18P-201ENST00000384527 107 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 MIR10A-201ENST00000385043 110 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 SNORA46.1-201ENST00000391069 153 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 AL357139.1-201ENST00000407792 426 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 TOMM20P4-201ENST00000427861 435 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 AC009237.7-201ENST00000447357 229 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 RNU6-377P-201ENST00000515965 102 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 AL161798.1-201ENST00000604630 131 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 AC233981.2-201ENST00000611524 1614 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF43Q68DV7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RNF43Q68DV7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF43Q68DV7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF43Q68DV7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF43Q68DV7 SAGE2P-201ENST00000420011 2126 ntBASIC4.3□□□□□ -1.72
RNF43Q68DV7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF43Q68DV7 RNU6-626P-201ENST00000363354 107 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 Y_RNA.136-201ENST00000363444 102 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 AL445584.1-201ENST00000431451 330 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 AL356535.1-201ENST00000440335 398 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 AC117440.1-201ENST00000474107 571 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 RPL26P26-201ENST00000480251 434 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 SNORD116-26-201ENST00000516006 96 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 AL359881.1-201ENST00000602916 267 ntBASIC4.29□□□□□ -1.72
RNF43Q68DV7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF43Q68DV7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF43Q68DV7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF43Q68DV7 RNU4-56P-201ENST00000364700 142 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 RNU6-336P-201ENST00000364891 107 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 Y_RNA.570-201ENST00000384750 101 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 Y_RNA.571-201ENST00000384753 98 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 AP000907.1-201ENST00000428428 510 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 AC011742.1-201ENST00000431448 434 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 AL627311.1-201ENST00000431514 115 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 IFNA11P-201ENST00000446352 526 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 RPL23AP3-201ENST00000453844 468 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 AC010409.1-201ENST00000487382 476 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 RPL23AP75-201ENST00000491601 451 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 MIR2114-201ENST00000516645 80 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 KLKP1-201ENST00000595979 403 ntBASIC4.28□□□□□ -1.72
RNF43Q68DV7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF43Q68DV7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RNF43Q68DV7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF43Q68DV7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF43Q68DV7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF43Q68DV7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 RNU6-653P-201ENST00000363074 106 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 RNU6-20P-201ENST00000384106 107 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 MIR569-201ENST00000385228 96 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 RNA5SP213-201ENST00000391031 106 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 BTF3L4P2-201ENST00000392798 346 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 UBA52P6-201ENST00000399822 382 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC091390.3-201ENST00000426478 338 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 MTATP6P4-201ENST00000427725 675 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 POLR2KP2-201ENST00000438155 177 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 AP000870.1-201ENST00000472927 406 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 RPS4XP22-201ENST00000480755 780 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 RPS27P26-201ENST00000494583 239 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 HMGB3P3-201ENST00000510526 400 ntBASIC4.27□□□□□ -1.73
RNF43Q68DV7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF43Q68DV7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms